Analysis of interatomic Contacts of Structural Units in PDB entry:
5UNF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UNF entry

There are 2 chains in PDB entry 5UNF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1001ARG 334
B
 ALA 1001ARG 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 5UNF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1002 1019Right-handed alpha
Helix 2
AA2
A
1022 1043Right-handed alpha
Helix 3
AA3
A
1055 1082Right-handed alpha
Helix 4
AA4
A
1083 1092Right-handed alpha
Helix 5
AA5
A
1092 1100Right-handed alpha
Helix 6
AA6
A
45 72Right-handed alpha
Helix 7
AA7
A
78 95Right-handed alpha
Helix 8
AA8
A
96 106Right-handed alpha
Helix 9
AA9
A
112 148Right-handed alpha
Helix 10
AB1
A
158 175Right-handed alpha
Helix 11
AB2
A
175 181Right-handed alpha
Helix 12
AB3
A
200 203Right-handed 310
Helix 13
AB4
A
204 220Right-handed alpha
Helix 14
AB5
A
220 241Right-handed alpha
Helix 15
AB6
A
245 284Right-handed alpha
Helix 16
AB7
A
289 319Right-handed alpha
Helix 17
AB8
A
321 334Right-handed alpha
Helix 18
AB9
B
1002 1019Right-handed alpha
Helix 19
AC1
B
1022 1043Right-handed alpha
Helix 20
AC2
B
1055 1082Right-handed alpha
Helix 21
AC3
B
1083 1091Right-handed alpha
Helix 22
AC4
B
1092 1103Right-handed alpha
Helix 23
AC5
B
1107 35Right-handed 310
Helix 24
AC6
B
45 72Right-handed alpha
Helix 25
AC7
B
78 95Right-handed alpha
Helix 26
AC8
B
96 106Right-handed alpha
Helix 27
AC9
B
112 148Right-handed alpha
Helix 28
AD1
B
159 175Right-handed alpha
Helix 29
AD2
B
175 181Right-handed alpha
Helix 30
AD3
B
200 202Right-handed 310
Helix 31
AD4
B
203 220Right-handed alpha
Helix 32
AD5
B
220 239Right-handed alpha
Helix 33
AD6
B
245 284Right-handed alpha
Helix 34
AD7
B
289 318Right-handed alpha
Helix 35
AD8
B
318 334Right-handed alpha
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There are 2 sheets in PDB entry 5UNF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 186first strand
Strand 2
A
193 197anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 186first strand
Strand 2
B
193 197anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il