Analysis of interatomic Contacts of Structural Units in PDB entry:
5UNL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UNL entry

There are 4 chains in PDB entry 5UNL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2LEU 265
B
 SER 4LEU 265
C
 THR 2LEU 265
D
 THR 2LEU 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 48 helices in PDB entry 5UNL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 7Right-handed alpha
Helix 2
AA2
A
22 35Right-handed alpha
Helix 3
AA3
A
45 51Right-handed alpha
Helix 4
AA4
A
70 85Right-handed alpha
Helix 5
AA5
A
108 120Right-handed alpha
Helix 6
AA6
A
120 135Right-handed alpha
Helix 7
AA7
A
148 152Right-handed 310
Helix 8
AA8
A
158 180Right-handed alpha
Helix 9
AA9
A
181 183Right-handed 310
Helix 10
AB1
A
196 211Right-handed alpha
Helix 11
AB2
A
213 224Right-handed alpha
Helix 12
AB3
A
232 244Right-handed alpha
Helix 13
AB4
B
4 8Right-handed 310
Helix 14
AB5
B
22 35Right-handed alpha
Helix 15
AB6
B
45 53Right-handed alpha
Helix 16
AB7
B
70 85Right-handed alpha
Helix 17
AB8
B
108 120Right-handed alpha
Helix 18
AB9
B
120 135Right-handed alpha
Helix 19
AC1
B
148 152Right-handed 310
Helix 20
AC2
B
158 180Right-handed alpha
Helix 21
AC3
B
181 183Right-handed 310
Helix 22
AC4
B
196 211Right-handed alpha
Helix 23
AC5
B
213 224Right-handed alpha
Helix 24
AC6
B
232 244Right-handed alpha
Helix 25
AC7
C
3 8Right-handed alpha
Helix 26
AC8
C
22 35Right-handed alpha
Helix 27
AC9
C
45 51Right-handed alpha
Helix 28
AD1
C
70 85Right-handed alpha
Helix 29
AD2
C
108 120Right-handed alpha
Helix 30
AD3
C
120 135Right-handed alpha
Helix 31
AD4
C
148 152Right-handed 310
Helix 32
AD5
C
158 180Right-handed alpha
Helix 33
AD6
C
181 183Right-handed 310
Helix 34
AD7
C
196 211Right-handed alpha
Helix 35
AD8
C
213 224Right-handed alpha
Helix 36
AD9
C
232 244Right-handed alpha
Helix 37
AE1
D
3 7Right-handed alpha
Helix 38
AE2
D
22 35Right-handed alpha
Helix 39
AE3
D
45 51Right-handed alpha
Helix 40
AE4
D
70 85Right-handed alpha
Helix 41
AE5
D
108 120Right-handed alpha
Helix 42
AE6
D
120 135Right-handed alpha
Helix 43
AE7
D
148 152Right-handed 310
Helix 44
AE8
D
158 180Right-handed alpha
Helix 45
AE9
D
181 183Right-handed 310
Helix 46
AF1
D
196 211Right-handed alpha
Helix 47
AF2
D
213 224Right-handed alpha
Helix 48
AF3
D
232 244Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 5UNL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 65first strand
Strand 2
A
38 43parallel
Strand 3
A
14 17parallel
Strand 4
A
90 93parallel
Strand 5
A
142 146parallel
Strand 6
A
185 191parallel
Strand 7
A
255 258parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 65first strand
Strand 2
B
38 43parallel
Strand 3
B
14 17parallel
Strand 4
B
90 93parallel
Strand 5
B
142 146parallel
Strand 6
B
185 191parallel
Strand 7
B
255 258parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
62 65first strand
Strand 2
C
38 43parallel
Strand 3
C
14 18parallel
Strand 4
C
90 93parallel
Strand 5
C
142 146parallel
Strand 6
C
185 191parallel
Strand 7
C
255 258parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
62 65first strand
Strand 2
D
38 43parallel
Strand 3
D
14 17parallel
Strand 4
D
90 93parallel
Strand 5
D
142 146parallel
Strand 6
D
185 191parallel
Strand 7
D
255 258parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il