Analysis of interatomic Contacts of Structural Units in PDB entry:
5UOW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5UOW entry

There are 2 chains in PDB entry 5UOW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 23	LYS 836
B	PHE 25	PRO 666

There are118 helices in PDB entry 5UOW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	53	Right-handed alpha
Helix 2	AA2	A	73	82	Right-handed alpha
Helix 3	AA3	A	105	115	Right-handed alpha
Helix 4	AA4	A	126	130	Right-handed 310
Helix 5	AA5	A	144	146	Right-handed 310
Helix 6	AA6	A	147	159	Right-handed alpha
Helix 7	AA7	A	170	187	Right-handed alpha
Helix 8	AA8	A	204	214	Right-handed alpha
Helix 9	AA9	A	224	238	Right-handed alpha
Helix 10	AB1	A	250	255	Right-handed alpha
Helix 11	AB2	A	256	260	Right-handed 310
Helix 12	AB3	A	276	296	Right-handed alpha
Helix 13	AB4	A	316	327	Right-handed alpha
Helix 14	AB5	A	356	360	Right-handed 310
Helix 15	AB6	A	455	468	Right-handed alpha
Helix 16	AB7	A	497	506	Right-handed alpha
Helix 17	AB8	A	518	523	Right-handed alpha
Helix 18	AB9	A	549	559	Right-handed alpha
Helix 19	AC1	A	559	580	Right-handed alpha
Helix 20	AC2	A	601	614	Right-handed alpha
Helix 21	AC3	A	624	654	Right-handed alpha
Helix 22	AC4	A	667	672	Right-handed alpha
Helix 23	AC5	A	686	694	Right-handed alpha
Helix 24	AC6	A	697	706	Right-handed alpha
Helix 25	AC7	A	711	721	Right-handed alpha
Helix 26	AC8	A	731	742	Right-handed alpha
Helix 27	AC9	A	766	780	Right-handed alpha
Helix 28	AD1	A	781	792	Right-handed alpha
Helix 29	AD2	A	808	835	Right-handed alpha
Helix 30	AD3	B	41	54	Right-handed alpha
Helix 31	AD4	B	70	85	Right-handed alpha
Helix 32	AD5	B	100	113	Right-handed alpha
Helix 33	AD6	B	120	125	Right-handed alpha
Helix 34	AD7	B	142	158	Right-handed alpha
Helix 35	AD8	B	171	185	Right-handed alpha
Helix 36	AD9	B	204	214	Right-handed alpha
Helix 37	AE1	B	224	239	Right-handed alpha
Helix 38	AE2	B	250	255	Right-handed alpha
Helix 39	AE3	B	279	299	Right-handed alpha
Helix 40	AE4	B	316	320	Right-handed 310
Helix 41	AE5	B	446	459	Right-handed alpha
Helix 42	AE6	B	483	490	Right-handed alpha
Helix 43	AE7	B	503	510	Right-handed alpha
Helix 44	AE8	B	532	568	Right-handed alpha
Helix 45	AE9	B	586	601	Right-handed alpha
Helix 46	AF1	B	612	644	Right-handed alpha
Helix 47	AF2	B	655	660	Right-handed alpha
Helix 48	AF3	B	661	664	Right-handed 310
Helix 49	AF4	B	676	684	Right-handed alpha
Helix 50	AF5	B	686	696	Right-handed alpha
Helix 51	AF6	B	700	710	Right-handed alpha
Helix 52	AF7	B	720	730	Right-handed alpha
Helix 53	AF8	B	759	773	Right-handed alpha
Helix 54	AF9	B	774	784	Right-handed alpha
Helix 55	AG1	B	801	828	Right-handed alpha
Helix 56	AG2	C	35	53	Right-handed alpha
Helix 57	AG3	C	70	80	Right-handed alpha
Helix 58	AG4	C	105	114	Right-handed alpha
Helix 59	AG5	C	125	129	Right-handed 310
Helix 60	AG6	C	146	159	Right-handed alpha
Helix 61	AG7	C	170	187	Right-handed alpha
Helix 62	AG8	C	204	214	Right-handed alpha
Helix 63	AG9	C	224	238	Right-handed alpha
Helix 64	AH1	C	250	255	Right-handed alpha
Helix 65	AH2	C	256	261	Right-handed alpha
Helix 66	AH3	C	276	296	Right-handed alpha
Helix 67	AH4	C	318	327	Right-handed alpha
Helix 68	AH5	C	455	468	Right-handed alpha
Helix 69	AH6	C	478	481	Right-handed 310
Helix 70	AH7	C	497	505	Right-handed alpha
Helix 71	AH8	C	518	523	Right-handed alpha
Helix 72	AH9	C	548	582	Right-handed alpha
Helix 73	AI1	C	600	614	Right-handed alpha
Helix 74	AI2	C	624	652	Right-handed alpha
Helix 75	AI3	C	653	655	Right-handed 310
Helix 76	AI4	C	667	672	Right-handed alpha
Helix 77	AI5	C	685	694	Right-handed alpha
Helix 78	AI6	C	698	705	Right-handed alpha
Helix 79	AI7	C	711	721	Right-handed alpha
Helix 80	AI8	C	731	741	Right-handed alpha
Helix 81	AI9	C	766	781	Right-handed alpha
Helix 82	AJ1	C	781	792	Right-handed alpha
Helix 83	AJ2	C	804	836	Right-handed alpha
Helix 84	AJ3	D	43	55	Right-handed alpha
Helix 85	AJ4	D	72	88	Right-handed alpha
Helix 86	AJ5	D	101	115	Right-handed alpha
Helix 87	AJ6	D	122	127	Right-handed alpha
Helix 88	AJ7	D	144	159	Right-handed alpha
Helix 89	AJ8	D	173	188	Right-handed alpha
Helix 90	AJ9	D	206	217	Right-handed alpha
Helix 91	AK1	D	228	243	Right-handed alpha
Helix 92	AK2	D	254	259	Right-handed alpha
Helix 93	AK3	D	283	305	Right-handed alpha
Helix 94	AK4	D	321	325	Right-handed 310
Helix 95	AK5	D	326	336	Right-handed alpha
Helix 96	AK6	D	452	466	Right-handed alpha
Helix 97	AK7	D	489	496	Right-handed alpha
Helix 98	AK8	D	509	516	Right-handed alpha
Helix 99	AK9	D	543	549	Right-handed alpha
Helix 100	AL1	D	549	574	Right-handed alpha
Helix 101	AL2	D	595	607	Right-handed alpha
Helix 102	AL3	D	619	649	Right-handed alpha
Helix 103	AL4	D	682	692	Right-handed alpha
Helix 104	AL5	D	692	700	Right-handed alpha
Helix 105	AL6	D	701	703	Right-handed 310
Helix 106	AL7	D	706	716	Right-handed alpha
Helix 107	AL8	D	726	735	Right-handed alpha
Helix 108	AL9	D	765	780	Right-handed alpha
Helix 109	AM1	D	780	790	Right-handed alpha
Helix 110	AM2	D	809	837	Right-handed alpha
Helix 111	AM3	F	80	84	Right-handed 310
Helix 112	AM4	F	122	128	Right-handed alpha
Helix 113	AM5	F	184	189	Right-handed alpha
Helix 114	AM6	G	54	56	Right-handed 310
Helix 115	AM7	G	61	66	Right-handed alpha
Helix 116	AM8	G	87	91	Right-handed 310
Helix 117	AM9	G	158	160	Right-handed 310
Helix 118	AN1	G	203	205	Right-handed 310

There are 39 sheets in PDB entry 5UOW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	65	first strand
Strand 2	A	26	32	parallel
Strand 3	A	90	92	parallel
Strand 4	A	118	120	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	194	197	first strand
Strand 2	A	164	168	parallel
Strand 3	A	218	222	parallel
Strand 4	A	246	249	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	268	271	first strand
Strand 2	A	351	355	anti-parallel
Strand 3	A	362	368	anti-parallel
Strand 4	A	371	374	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	471	474	first strand
Strand 2	A	397	401	parallel
Strand 3	A	510	511	parallel
Strand 4	A	759	760	anti-parallel
Strand 5	A	526	527	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	410	412	first strand
Strand 2	A	448	454	anti-parallel
Strand 3	A	434	439	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	679	680	first strand
Strand 2	A	726	730	parallel
Strand 3	A	533	539	anti-parallel
Strand 4	A	746	755	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	65	first strand
Strand 2	B	29	35	parallel
Strand 3	B	89	94	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	165	first strand
Strand 2	B	218	221	parallel
Strand 3	B	246	249	parallel
Strand 4	B	269	270	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	332	335	first strand
Strand 2	B	338	341	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	353	358	first strand
Strand 2	B	364	371	anti-parallel
Strand 3	B	374	377	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	463	466	first strand
Strand 2	B	394	398	parallel
Strand 3	B	496	497	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	406	409	first strand
Strand 2	B	439	445	anti-parallel
Strand 3	B	422	426	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	475	477	first strand
Strand 2	B	480	482	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	521	524	first strand
Strand 2	B	715	719	anti-parallel
Strand 3	B	670	671	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	66	first strand
Strand 2	C	27	33	parallel
Strand 3	C	90	92	parallel
Strand 4	C	118	120	parallel
Strand 5	C	137	139	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	194	197	first strand
Strand 2	C	164	168	parallel
Strand 3	C	218	222	parallel
Strand 4	C	246	249	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	267	271	first strand
Strand 2	C	351	355	anti-parallel
Strand 3	C	362	367	anti-parallel
Strand 4	C	372	374	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	410	413	first strand
Strand 2	C	449	454	anti-parallel
Strand 3	C	434	438	anti-parallel
Strand 4	C	471	476	parallel
Strand 5	C	397	402	parallel
Strand 6	C	510	511	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	516	517	first strand
Strand 2	C	751	756	anti-parallel
Strand 3	C	532	541	anti-parallel
Strand 4	C	726	730	anti-parallel
Strand 5	C	679	680	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	516	517	first strand
Strand 2	C	751	756	anti-parallel
Strand 3	C	532	541	anti-parallel
Strand 4	C	744	746	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	525	527	first strand
Strand 2	C	759	761	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	60	68	first strand
Strand 2	D	29	37	parallel
Strand 3	D	91	96	parallel
Strand 4	D	118	120	parallel
Strand 5	D	139	140	parallel

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There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	193	200	first strand
Strand 2	D	163	169	parallel
Strand 3	D	222	226	parallel
Strand 4	D	250	253	parallel
Strand 5	D	273	277	parallel
Strand 6	D	357	362	anti-parallel
Strand 7	D	368	375	anti-parallel
Strand 8	D	378	379	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	338	339	first strand
Strand 2	D	342	343	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	470	473	first strand
Strand 2	D	400	403	parallel
Strand 3	D	501	502	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	411	414	first strand
Strand 2	D	448	451	anti-parallel
Strand 3	D	427	429	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	481	483	first strand
Strand 2	D	486	488	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	524	525	first strand
Strand 2	D	753	754	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	676	677	first strand
Strand 2	D	721	725	parallel
Strand 3	D	527	532	anti-parallel
Strand 4	D	741	743	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	7	first strand
Strand 2	F	19	25	anti-parallel
Strand 3	F	71	76	anti-parallel
Strand 4	F	63	68	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	13	first strand
Strand 2	F	103	107	parallel
Strand 3	F	86	91	anti-parallel
Strand 4	F	34	39	anti-parallel
Strand 5	F	45	50	anti-parallel
Strand 6	F	54	55	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	13	first strand
Strand 2	F	103	107	parallel
Strand 3	F	86	91	anti-parallel
Strand 4	F	98	99	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	115	119	first strand
Strand 2	F	130	140	anti-parallel
Strand 3	F	174	183	anti-parallel
Strand 4	F	160	165	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	154	156	first strand
Strand 2	F	145	151	anti-parallel
Strand 3	F	192	199	anti-parallel
Strand 4	F	206	211	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	7	first strand
Strand 2	G	18	25	anti-parallel
Strand 3	G	78	83	anti-parallel
Strand 4	G	68	73	anti-parallel

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There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	113	117	parallel
Strand 3	G	92	99	anti-parallel
Strand 4	G	33	40	anti-parallel
Strand 5	G	44	52	anti-parallel
Strand 6	G	57	60	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	113	117	parallel
Strand 3	G	92	99	anti-parallel
Strand 4	G	108	109	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	126	131	first strand
Strand 2	G	137	147	anti-parallel
Strand 3	G	176	186	anti-parallel
Strand 4	G	165	173	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	152	156	first strand
Strand 2	G	196	201	anti-parallel
Strand 3	G	206	211	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5UOW

Analysis of interatomic Contacts of Structural Units in PDB entry:
5UOW