Analysis of interatomic Contacts of Structural Units in PDB entry:
5UQY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5UQY entry

There are 16 chains in PDB entry 5UQY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 36	SER 180
B	SER 471	SER 621
C	ILE 2	ARG 211
D	GLN 1	LYS 226
E	CYS 37	SER 180
F	SER 471	TRP 598
G	ILE 2	ARG 211
H	GLN 1	LYS 226
I	GLY 39	SER 180
J	SER 471	TRP 598
K	ILE 2	ARG 211
L	GLN 1	LYS 226
M	GLY 39	SER 180
N	SER 471	GLY 599
O	ILE 2	ARG 211
P	GLN 1	LYS 226

There are 42 helices in PDB entry 5UQY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	62	68	Right-handed alpha
Helix 2	AA2	A	171	180	Right-handed alpha
Helix 3	AA3	B	554	577	Right-handed alpha
Helix 4	AA4	B	585	598	Right-handed alpha
Helix 5	AA5	B	615	621	Right-handed alpha
Helix 6	AA6	C	79	83	Right-handed 310
Helix 7	AA7	C	121	128	Right-handed alpha
Helix 8	AA8	C	183	188	Right-handed alpha
Helix 9	AA9	D	88	92	Right-handed 310
Helix 10	AB1	D	168	170	Right-handed 310
Helix 11	AB2	D	199	204	Right-handed alpha
Helix 12	AB3	E	62	68	Right-handed alpha
Helix 13	AB4	E	171	179	Right-handed alpha
Helix 14	AB5	F	554	577	Right-handed alpha
Helix 15	AB6	F	585	598	Right-handed alpha
Helix 16	AB7	G	79	83	Right-handed 310
Helix 17	AB8	G	121	128	Right-handed alpha
Helix 18	AB9	G	183	188	Right-handed alpha
Helix 19	AC1	H	88	92	Right-handed 310
Helix 20	AC2	H	168	170	Right-handed 310
Helix 21	AC3	H	199	204	Right-handed alpha
Helix 22	AC4	H	213	216	Right-handed 310
Helix 23	AC5	I	62	68	Right-handed alpha
Helix 24	AC6	I	171	179	Right-handed alpha
Helix 25	AC7	J	554	577	Right-handed alpha
Helix 26	AC8	J	585	598	Right-handed alpha
Helix 27	AC9	K	79	83	Right-handed 310
Helix 28	AD1	K	121	128	Right-handed alpha
Helix 29	AD2	K	183	188	Right-handed alpha
Helix 30	AD3	L	88	92	Right-handed 310
Helix 31	AD4	L	168	170	Right-handed 310
Helix 32	AD5	L	199	204	Right-handed alpha
Helix 33	AD6	M	62	68	Right-handed alpha
Helix 34	AD7	M	171	179	Right-handed alpha
Helix 35	AD8	N	554	577	Right-handed alpha
Helix 36	AD9	N	585	598	Right-handed alpha
Helix 37	AE1	O	79	83	Right-handed 310
Helix 38	AE2	O	121	128	Right-handed alpha
Helix 39	AE3	O	183	188	Right-handed alpha
Helix 40	AE4	P	88	92	Right-handed 310
Helix 41	AE5	P	168	170	Right-handed 310
Helix 42	AE6	P	199	204	Right-handed alpha

There are 60 sheets in PDB entry 5UQY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	82	first strand
Strand 2	A	149	151	anti-parallel
Strand 3	A	143	146	anti-parallel
Strand 4	A	161	169	anti-parallel
Strand 5	A	47	53	anti-parallel
Strand 6	A	85	87	parallel
Strand 7	B	517	520	anti-parallel
Strand 8	B	545	548	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	73	first strand
Strand 2	A	135	138	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	98	first strand
Strand 2	A	119	128	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	474	476	first strand
Strand 2	B	490	492	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	7	first strand
Strand 2	C	19	24	anti-parallel
Strand 3	C	70	75	anti-parallel
Strand 4	C	62	67	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	12	first strand
Strand 2	C	102	105	parallel
Strand 3	C	85	92	anti-parallel
Strand 4	C	34	38	anti-parallel
Strand 5	C	45	49	anti-parallel
Strand 6	C	53	54	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	12	first strand
Strand 2	C	102	105	parallel
Strand 3	C	85	92	anti-parallel
Strand 4	C	95	98	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	114	118	first strand
Strand 2	C	129	139	anti-parallel
Strand 3	C	173	182	anti-parallel
Strand 4	C	159	163	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	155	first strand
Strand 2	C	144	150	anti-parallel
Strand 3	C	192	198	anti-parallel
Strand 4	C	205	209	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	18	25	anti-parallel
Strand 3	D	79	84	anti-parallel
Strand 4	D	69	74	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	119	123	parallel
Strand 3	D	93	103	anti-parallel
Strand 4	D	34	41	anti-parallel
Strand 5	D	48	53	anti-parallel
Strand 6	D	59	61	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	119	123	parallel
Strand 3	D	93	103	anti-parallel
Strand 4	D	109	115	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	132	136	first strand
Strand 2	D	148	157	anti-parallel
Strand 3	D	188	196	anti-parallel
Strand 4	D	175	177	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	132	136	first strand
Strand 2	D	148	157	anti-parallel
Strand 3	D	188	196	anti-parallel
Strand 4	D	181	182	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	163	166	first strand
Strand 2	D	206	212	anti-parallel
Strand 3	D	217	223	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	80	82	first strand
Strand 2	E	149	151	anti-parallel
Strand 3	E	143	146	anti-parallel
Strand 4	E	161	169	anti-parallel
Strand 5	E	47	53	anti-parallel
Strand 6	E	85	87	parallel
Strand 7	F	516	520	anti-parallel
Strand 8	F	545	549	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	70	73	first strand
Strand 2	E	135	138	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	89	98	first strand
Strand 2	E	119	128	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	474	475	first strand
Strand 2	F	491	492	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5	7	first strand
Strand 2	G	19	24	anti-parallel
Strand 3	G	70	75	anti-parallel
Strand 4	G	62	67	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	12	first strand
Strand 2	G	102	105	parallel
Strand 3	G	85	92	anti-parallel
Strand 4	G	34	38	anti-parallel
Strand 5	G	45	48	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	12	first strand
Strand 2	G	102	105	parallel
Strand 3	G	85	92	anti-parallel
Strand 4	G	95	98	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	114	118	first strand
Strand 2	G	129	139	anti-parallel
Strand 3	G	173	182	anti-parallel
Strand 4	G	159	163	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	145	150	first strand
Strand 2	G	192	197	anti-parallel
Strand 3	G	205	209	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	79	84	anti-parallel
Strand 4	H	69	74	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	119	123	parallel
Strand 3	H	93	103	anti-parallel
Strand 4	H	34	41	anti-parallel
Strand 5	H	48	53	anti-parallel
Strand 6	H	59	61	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	119	123	parallel
Strand 3	H	93	103	anti-parallel
Strand 4	H	109	115	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	132	136	first strand
Strand 2	H	147	157	anti-parallel
Strand 3	H	188	197	anti-parallel
Strand 4	H	175	177	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	132	136	first strand
Strand 2	H	147	157	anti-parallel
Strand 3	H	188	197	anti-parallel
Strand 4	H	181	182	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	163	166	first strand
Strand 2	H	206	212	anti-parallel
Strand 3	H	217	223	anti-parallel

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There are 8 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	80	82	first strand
Strand 2	I	149	151	anti-parallel
Strand 3	I	143	146	anti-parallel
Strand 4	I	161	169	anti-parallel
Strand 5	I	47	53	anti-parallel
Strand 6	I	85	87	parallel
Strand 7	J	517	520	anti-parallel
Strand 8	J	545	548	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	70	73	first strand
Strand 2	I	135	138	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	89	98	first strand
Strand 2	I	119	128	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	474	475	first strand
Strand 2	J	491	492	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	5	7	first strand
Strand 2	K	19	24	anti-parallel
Strand 3	K	70	75	anti-parallel
Strand 4	K	62	67	anti-parallel

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There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	14	first strand
Strand 2	K	102	107	parallel
Strand 3	K	85	92	anti-parallel
Strand 4	K	34	38	anti-parallel
Strand 5	K	45	49	anti-parallel
Strand 6	K	53	54	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	14	first strand
Strand 2	K	102	107	parallel
Strand 3	K	85	92	anti-parallel
Strand 4	K	95	98	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	114	118	first strand
Strand 2	K	129	139	anti-parallel
Strand 3	K	173	182	anti-parallel
Strand 4	K	159	163	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	145	150	first strand
Strand 2	K	192	197	anti-parallel
Strand 3	K	205	209	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	3	7	first strand
Strand 2	L	18	25	anti-parallel
Strand 3	L	79	84	anti-parallel
Strand 4	L	69	74	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	12	first strand
Strand 2	L	119	123	parallel
Strand 3	L	93	103	anti-parallel
Strand 4	L	34	41	anti-parallel
Strand 5	L	48	53	anti-parallel
Strand 6	L	59	61	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	12	first strand
Strand 2	L	119	123	parallel
Strand 3	L	93	103	anti-parallel
Strand 4	L	109	115	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	132	136	first strand
Strand 2	L	147	157	anti-parallel
Strand 3	L	188	197	anti-parallel
Strand 4	L	175	177	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	132	136	first strand
Strand 2	L	147	157	anti-parallel
Strand 3	L	188	197	anti-parallel
Strand 4	L	181	182	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	163	166	first strand
Strand 2	L	206	212	anti-parallel
Strand 3	L	217	223	anti-parallel

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There are 8 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	80	82	first strand
Strand 2	M	149	151	anti-parallel
Strand 3	M	143	146	anti-parallel
Strand 4	M	161	169	anti-parallel
Strand 5	M	47	53	anti-parallel
Strand 6	M	85	87	parallel
Strand 7	N	516	520	anti-parallel
Strand 8	N	545	549	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	70	73	first strand
Strand 2	M	135	138	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	89	98	first strand
Strand 2	M	119	128	parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	474	475	first strand
Strand 2	N	491	492	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	5	7	first strand
Strand 2	O	19	24	anti-parallel
Strand 3	O	70	75	anti-parallel
Strand 4	O	62	67	anti-parallel

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There are 6 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	10	14	first strand
Strand 2	O	102	107	parallel
Strand 3	O	85	92	anti-parallel
Strand 4	O	34	38	anti-parallel
Strand 5	O	45	49	anti-parallel
Strand 6	O	53	54	anti-parallel

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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	10	14	first strand
Strand 2	O	102	107	parallel
Strand 3	O	85	92	anti-parallel
Strand 4	O	95	98	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	114	118	first strand
Strand 2	O	129	139	anti-parallel
Strand 3	O	173	182	anti-parallel
Strand 4	O	159	163	anti-parallel

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There are 3 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	145	150	first strand
Strand 2	O	192	197	anti-parallel
Strand 3	O	206	209	anti-parallel

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There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	3	7	first strand
Strand 2	P	18	25	anti-parallel
Strand 3	P	79	84	anti-parallel
Strand 4	P	69	74	anti-parallel

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There are 6 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	11	12	first strand
Strand 2	P	119	123	parallel
Strand 3	P	93	103	anti-parallel
Strand 4	P	34	41	anti-parallel
Strand 5	P	48	53	anti-parallel
Strand 6	P	59	61	anti-parallel

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There are 4 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	11	12	first strand
Strand 2	P	119	123	parallel
Strand 3	P	93	103	anti-parallel
Strand 4	P	109	115	anti-parallel

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There are 4 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	132	134	first strand
Strand 2	P	153	157	anti-parallel
Strand 3	P	188	194	anti-parallel
Strand 4	P	175	177	anti-parallel

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There are 4 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	132	134	first strand
Strand 2	P	153	157	anti-parallel
Strand 3	P	188	194	anti-parallel
Strand 4	P	181	182	anti-parallel

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There are 3 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	163	166	first strand
Strand 2	P	206	212	anti-parallel
Strand 3	P	217	223	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 5UQY

Analysis of interatomic Contacts of Structural Units in PDB entry:
5UQY