Analysis of interatomic Contacts of Structural Units in PDB entry:
5UR2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5UR2 entry

There are 2 chains in PDB entry 5UR2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 3	GLU 981
B	GLY -1	ASN 354

There are163 helices in PDB entry 5UR2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	21	Right-handed alpha
Helix 2	AA2	A	32	44	Right-handed alpha
Helix 3	AA3	A	44	58	Right-handed alpha
Helix 4	AA4	A	59	61	Right-handed 310
Helix 5	AA5	A	63	75	Right-handed alpha
Helix 6	AA6	A	99	114	Right-handed alpha
Helix 7	AA7	A	120	134	Right-handed alpha
Helix 8	AA8	A	149	172	Right-handed alpha
Helix 9	AA9	A	177	182	Right-handed alpha
Helix 10	AB1	A	196	201	Right-handed 310
Helix 11	AB2	A	205	207	Right-handed 310
Helix 12	AB3	A	208	230	Right-handed alpha
Helix 13	AB4	A	240	242	Right-handed 310
Helix 14	AB5	A	243	256	Right-handed alpha
Helix 15	AB6	A	276	292	Right-handed alpha
Helix 16	AB7	A	304	316	Right-handed alpha
Helix 17	AB8	A	324	342	Right-handed alpha
Helix 18	AB9	A	354	368	Right-handed alpha
Helix 19	AC1	A	371	375	Right-handed 310
Helix 20	AC2	A	384	394	Right-handed alpha
Helix 21	AC3	A	406	422	Right-handed alpha
Helix 22	AC4	A	426	433	Right-handed alpha
Helix 23	AC5	A	437	443	Right-handed alpha
Helix 24	AC6	A	473	490	Right-handed alpha
Helix 25	AC7	A	529	548	Right-handed alpha
Helix 26	AC8	A	551	569	Right-handed alpha
Helix 27	AC9	A	569	582	Right-handed alpha
Helix 28	AD1	A	584	610	Right-handed alpha
Helix 29	AD2	A	643	656	Right-handed alpha
Helix 30	AD3	A	665	667	Right-handed 310
Helix 31	AD4	A	668	683	Right-handed alpha
Helix 32	AD5	A	698	706	Right-handed alpha
Helix 33	AD6	A	717	729	Right-handed alpha
Helix 34	AD7	A	758	772	Right-handed alpha
Helix 35	AD8	A	773	776	Right-handed 310
Helix 36	AD9	A	790	803	Right-handed alpha
Helix 37	AE1	A	822	838	Right-handed alpha
Helix 38	AE2	A	867	871	Right-handed 310
Helix 39	AE3	A	886	895	Right-handed alpha
Helix 40	AE4	A	909	920	Right-handed alpha
Helix 41	AE5	A	958	961	Right-handed 310
Helix 42	AE6	B	3	21	Right-handed alpha
Helix 43	AE7	B	32	44	Right-handed alpha
Helix 44	AE8	B	44	58	Right-handed alpha
Helix 45	AE9	B	59	61	Right-handed 310
Helix 46	AF1	B	63	75	Right-handed alpha
Helix 47	AF2	B	101	114	Right-handed alpha
Helix 48	AF3	B	120	134	Right-handed alpha
Helix 49	AF4	B	149	172	Right-handed alpha
Helix 50	AF5	B	177	182	Right-handed alpha
Helix 51	AF6	B	196	201	Right-handed 310
Helix 52	AF7	B	205	207	Right-handed 310
Helix 53	AF8	B	208	231	Right-handed alpha
Helix 54	AF9	B	240	242	Right-handed 310
Helix 55	AG1	B	243	256	Right-handed alpha
Helix 56	AG2	B	276	292	Right-handed alpha
Helix 57	AG3	B	304	316	Right-handed alpha
Helix 58	AG4	B	324	342	Right-handed alpha
Helix 59	AG5	B	354	368	Right-handed alpha
Helix 60	AG6	B	371	375	Right-handed 310
Helix 61	AG7	B	384	394	Right-handed alpha
Helix 62	AG8	B	406	422	Right-handed alpha
Helix 63	AG9	B	426	433	Right-handed alpha
Helix 64	AH1	B	437	443	Right-handed alpha
Helix 65	AH2	B	473	490	Right-handed alpha
Helix 66	AH3	B	529	548	Right-handed alpha
Helix 67	AH4	B	551	569	Right-handed alpha
Helix 68	AH5	B	569	582	Right-handed alpha
Helix 69	AH6	B	584	610	Right-handed alpha
Helix 70	AH7	B	643	656	Right-handed alpha
Helix 71	AH8	B	668	683	Right-handed alpha
Helix 72	AH9	B	698	706	Right-handed alpha
Helix 73	AI1	B	717	729	Right-handed alpha
Helix 74	AI2	B	758	772	Right-handed alpha
Helix 75	AI3	B	773	776	Right-handed 310
Helix 76	AI4	B	788	805	Right-handed alpha
Helix 77	AI5	B	822	840	Right-handed alpha
Helix 78	AI6	B	867	871	Right-handed 310
Helix 79	AI7	B	886	895	Right-handed alpha
Helix 80	AI8	B	909	920	Right-handed alpha
Helix 81	AI9	B	958	961	Right-handed 310
Helix 82	AJ1	C	3	21	Right-handed alpha
Helix 83	AJ2	C	33	44	Right-handed alpha
Helix 84	AJ3	C	44	58	Right-handed alpha
Helix 85	AJ4	C	59	61	Right-handed 310
Helix 86	AJ5	C	63	75	Right-handed alpha
Helix 87	AJ6	C	99	116	Right-handed alpha
Helix 88	AJ7	C	120	134	Right-handed alpha
Helix 89	AJ8	C	149	172	Right-handed alpha
Helix 90	AJ9	C	177	182	Right-handed alpha
Helix 91	AK1	C	196	201	Right-handed 310
Helix 92	AK2	C	205	207	Right-handed 310
Helix 93	AK3	C	208	231	Right-handed alpha
Helix 94	AK4	C	240	242	Right-handed 310
Helix 95	AK5	C	243	256	Right-handed alpha
Helix 96	AK6	C	276	292	Right-handed alpha
Helix 97	AK7	C	304	316	Right-handed alpha
Helix 98	AK8	C	324	342	Right-handed alpha
Helix 99	AK9	C	354	368	Right-handed alpha
Helix 100	AL1	C	371	375	Right-handed 310
Helix 101	AL2	C	384	394	Right-handed alpha
Helix 102	AL3	C	406	423	Right-handed alpha
Helix 103	AL4	C	426	433	Right-handed alpha
Helix 104	AL5	C	437	442	Right-handed alpha
Helix 105	AL6	C	473	491	Right-handed alpha
Helix 106	AL7	C	529	548	Right-handed alpha
Helix 107	AL8	C	551	569	Right-handed alpha
Helix 108	AL9	C	569	582	Right-handed alpha
Helix 109	AM1	C	584	610	Right-handed alpha
Helix 110	AM2	C	643	656	Right-handed alpha
Helix 111	AM3	C	665	667	Right-handed 310
Helix 112	AM4	C	668	683	Right-handed alpha
Helix 113	AM5	C	698	706	Right-handed alpha
Helix 114	AM6	C	717	729	Right-handed alpha
Helix 115	AM7	C	758	772	Right-handed alpha
Helix 116	AM8	C	773	776	Right-handed 310
Helix 117	AM9	C	790	803	Right-handed alpha
Helix 118	AN1	C	822	840	Right-handed alpha
Helix 119	AN2	C	867	871	Right-handed 310
Helix 120	AN3	C	886	895	Right-handed alpha
Helix 121	AN4	C	909	920	Right-handed alpha
Helix 122	AN5	C	958	961	Right-handed 310
Helix 123	AN6	D	4	21	Right-handed alpha
Helix 124	AN7	D	32	44	Right-handed alpha
Helix 125	AN8	D	44	58	Right-handed alpha
Helix 126	AN9	D	59	61	Right-handed 310
Helix 127	AO1	D	63	75	Right-handed alpha
Helix 128	AO2	D	97	116	Right-handed alpha
Helix 129	AO3	D	120	134	Right-handed alpha
Helix 130	AO4	D	149	172	Right-handed alpha
Helix 131	AO5	D	177	182	Right-handed alpha
Helix 132	AO6	D	196	201	Right-handed 310
Helix 133	AO7	D	205	207	Right-handed 310
Helix 134	AO8	D	208	231	Right-handed alpha
Helix 135	AO9	D	240	242	Right-handed 310
Helix 136	AP1	D	243	256	Right-handed alpha
Helix 137	AP2	D	276	292	Right-handed alpha
Helix 138	AP3	D	304	316	Right-handed alpha
Helix 139	AP4	D	324	342	Right-handed alpha
Helix 140	AP5	D	354	368	Right-handed alpha
Helix 141	AP6	D	371	375	Right-handed 310
Helix 142	AP7	D	384	394	Right-handed alpha
Helix 143	AP8	D	406	422	Right-handed alpha
Helix 144	AP9	D	426	433	Right-handed alpha
Helix 145	AQ1	D	437	442	Right-handed alpha
Helix 146	AQ2	D	473	491	Right-handed alpha
Helix 147	AQ3	D	529	548	Right-handed alpha
Helix 148	AQ4	D	551	569	Right-handed alpha
Helix 149	AQ5	D	569	582	Right-handed alpha
Helix 150	AQ6	D	584	610	Right-handed alpha
Helix 151	AQ7	D	643	656	Right-handed alpha
Helix 152	AQ8	D	665	667	Right-handed 310
Helix 153	AQ9	D	668	683	Right-handed alpha
Helix 154	AR1	D	698	706	Right-handed alpha
Helix 155	AR2	D	717	730	Right-handed alpha
Helix 156	AR3	D	758	772	Right-handed alpha
Helix 157	AR4	D	773	776	Right-handed 310
Helix 158	AR5	D	790	805	Right-handed alpha
Helix 159	AR6	D	822	840	Right-handed alpha
Helix 160	AR7	D	867	871	Right-handed 310
Helix 161	AR8	D	886	895	Right-handed alpha
Helix 162	AR9	D	909	920	Right-handed alpha
Helix 163	AS1	D	958	961	Right-handed 310

There are 24 sheets in PDB entry 5UR2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	142	first strand
Strand 2	A	192	195	parallel
Strand 3	A	233	236	parallel
Strand 4	A	266	271	parallel
Strand 5	A	296	300	parallel
Strand 6	A	347	351	parallel
Strand 7	A	377	380	parallel
Strand 8	A	398	404	parallel
Strand 9	A	137	142	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	493	495	first strand
Strand 2	A	517	526	parallel
Strand 3	A	509	514	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	497	499	first strand
Strand 2	A	502	504	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	613	614	first strand
Strand 2	A	621	629	anti-parallel
Strand 3	A	963	971	anti-parallel
Strand 4	B	924	927	parallel
Strand 5	B	902	906	parallel
Strand 6	B	749	753	parallel
Strand 7	B	781	787	parallel
Strand 8	B	878	884	parallel
Strand 9	B	858	861	parallel
Strand 10	B	841	845	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	689	691	first strand
Strand 2	A	659	663	parallel
Strand 3	A	632	636	parallel
Strand 4	A	709	715	parallel
Strand 5	A	740	744	parallel
Strand 6	A	948	949	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	841	845	first strand
Strand 2	A	858	861	anti-parallel
Strand 3	A	878	884	parallel
Strand 4	A	781	787	parallel
Strand 5	A	749	753	parallel
Strand 6	A	902	906	parallel
Strand 7	A	924	927	parallel
Strand 8	B	963	971	parallel
Strand 9	B	621	629	anti-parallel
Strand 10	B	613	614	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	899	900	first strand
Strand 2	A	944	945	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	142	first strand
Strand 2	B	192	195	parallel
Strand 3	B	233	236	parallel
Strand 4	B	266	271	parallel
Strand 5	B	296	300	parallel
Strand 6	B	347	351	parallel
Strand 7	B	377	380	parallel
Strand 8	B	398	404	parallel
Strand 9	B	136	142	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	493	495	first strand
Strand 2	B	517	526	parallel
Strand 3	B	509	514	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	497	499	first strand
Strand 2	B	502	504	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	689	691	first strand
Strand 2	B	659	663	parallel
Strand 3	B	632	636	parallel
Strand 4	B	709	715	parallel
Strand 5	B	740	744	parallel
Strand 6	B	948	949	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	899	900	first strand
Strand 2	B	944	945	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	137	142	first strand
Strand 2	C	192	195	parallel
Strand 3	C	233	236	parallel
Strand 4	C	266	271	parallel
Strand 5	C	296	300	parallel
Strand 6	C	347	351	parallel
Strand 7	C	377	380	parallel
Strand 8	C	398	404	parallel
Strand 9	C	137	142	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	493	495	first strand
Strand 2	C	517	526	parallel
Strand 3	C	509	514	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	497	499	first strand
Strand 2	C	502	504	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	613	614	first strand
Strand 2	C	621	629	anti-parallel
Strand 3	C	963	971	anti-parallel
Strand 4	D	924	927	parallel
Strand 5	D	902	906	parallel
Strand 6	D	749	753	parallel
Strand 7	D	781	787	parallel
Strand 8	D	878	884	parallel
Strand 9	D	858	861	parallel
Strand 10	D	841	845	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	689	691	first strand
Strand 2	C	659	663	parallel
Strand 3	C	632	636	parallel
Strand 4	C	709	715	parallel
Strand 5	C	740	744	parallel
Strand 6	C	948	949	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	841	845	first strand
Strand 2	C	858	861	anti-parallel
Strand 3	C	878	884	parallel
Strand 4	C	781	787	parallel
Strand 5	C	749	753	parallel
Strand 6	C	902	906	parallel
Strand 7	C	924	927	parallel
Strand 8	D	963	971	parallel
Strand 9	D	621	629	anti-parallel
Strand 10	D	613	614	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	899	900	first strand
Strand 2	C	944	945	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	137	142	first strand
Strand 2	D	192	195	parallel
Strand 3	D	233	236	parallel
Strand 4	D	266	271	parallel
Strand 5	D	296	300	parallel
Strand 6	D	347	351	parallel
Strand 7	D	377	380	parallel
Strand 8	D	398	404	parallel
Strand 9	D	137	142	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	493	495	first strand
Strand 2	D	517	526	parallel
Strand 3	D	509	514	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	497	499	first strand
Strand 2	D	502	504	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	689	691	first strand
Strand 2	D	659	663	parallel
Strand 3	D	632	636	parallel
Strand 4	D	709	715	parallel
Strand 5	D	740	744	parallel
Strand 6	D	948	949	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	899	900	first strand
Strand 2	D	944	945	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5UR2

Analysis of interatomic Contacts of Structural Units in PDB entry:
5UR2