Analysis of interatomic Contacts of Structural Units in PDB entry:
5US6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5US6 entry

There are 6 chains in PDB entry 5US6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ASN 267
B	GLY 0	GLY 265
C	MET 1	LEU 266
D	MET 1	ASN 267
E	MET 1	ASN 267
F	GLY 0	LEU 45

There are118 helices in PDB entry 5US6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	24	Right-handed alpha
Helix 2	AA2	A	44	50	Right-handed alpha
Helix 3	AA3	A	61	69	Right-handed 310
Helix 4	AA4	A	77	92	Right-handed alpha
Helix 5	AA5	A	103	114	Right-handed alpha
Helix 6	AA6	A	126	144	Right-handed alpha
Helix 7	AA7	A	164	178	Right-handed alpha
Helix 8	AA8	A	181	185	Right-handed alpha
Helix 9	AA9	A	236	251	Right-handed alpha
Helix 10	AB1	A	259	265	Right-handed alpha
Helix 11	AB2	B	11	24	Right-handed alpha
Helix 12	AB3	B	44	50	Right-handed alpha
Helix 13	AB4	B	61	69	Right-handed 310
Helix 14	AB5	B	77	92	Right-handed alpha
Helix 15	AB6	B	103	114	Right-handed alpha
Helix 16	AB7	B	126	144	Right-handed alpha
Helix 17	AB8	B	164	178	Right-handed alpha
Helix 18	AB9	B	181	185	Right-handed alpha
Helix 19	AC1	B	236	251	Right-handed alpha
Helix 20	AC2	B	259	265	Right-handed alpha
Helix 21	AC3	C	11	24	Right-handed alpha
Helix 22	AC4	C	44	50	Right-handed alpha
Helix 23	AC5	C	61	69	Right-handed 310
Helix 24	AC6	C	77	92	Right-handed alpha
Helix 25	AC7	C	103	114	Right-handed alpha
Helix 26	AC8	C	126	144	Right-handed alpha
Helix 27	AC9	C	164	178	Right-handed alpha
Helix 28	AD1	C	181	185	Right-handed alpha
Helix 29	AD2	C	236	251	Right-handed alpha
Helix 30	AD3	C	259	265	Right-handed alpha
Helix 31	AD4	D	11	24	Right-handed alpha
Helix 32	AD5	D	61	69	Right-handed 310
Helix 33	AD6	D	77	92	Right-handed alpha
Helix 34	AD7	D	103	114	Right-handed alpha
Helix 35	AD8	D	126	144	Right-handed alpha
Helix 36	AD9	D	164	178	Right-handed alpha
Helix 37	AE1	D	181	185	Right-handed alpha
Helix 38	AE2	D	236	251	Right-handed alpha
Helix 39	AE3	D	259	265	Right-handed alpha
Helix 40	AE4	E	11	24	Right-handed alpha
Helix 41	AE5	E	44	50	Right-handed alpha
Helix 42	AE6	E	61	69	Right-handed 310
Helix 43	AE7	E	77	92	Right-handed alpha
Helix 44	AE8	E	103	114	Right-handed alpha
Helix 45	AE9	E	126	144	Right-handed alpha
Helix 46	AF1	E	164	178	Right-handed alpha
Helix 47	AF2	E	181	185	Right-handed alpha
Helix 48	AF3	E	236	251	Right-handed alpha
Helix 49	AF4	E	259	265	Right-handed alpha
Helix 50	AF5	F	11	24	Right-handed alpha
Helix 51	AF6	F	44	50	Right-handed alpha
Helix 52	AF7	F	61	69	Right-handed 310
Helix 53	AF8	F	77	91	Right-handed alpha
Helix 54	AF9	F	103	114	Right-handed alpha
Helix 55	AG1	F	126	144	Right-handed alpha
Helix 56	AG2	F	164	178	Right-handed alpha
Helix 57	AG3	F	181	185	Right-handed alpha
Helix 58	AG4	F	236	251	Right-handed alpha
Helix 59	AG5	F	259	265	Right-handed alpha
Helix 60	AG6	G	11	24	Right-handed alpha
Helix 61	AG7	G	44	50	Right-handed alpha
Helix 62	AG8	G	61	69	Right-handed 310
Helix 63	AG9	G	77	92	Right-handed alpha
Helix 64	AH1	G	103	117	Right-handed alpha
Helix 65	AH2	G	126	144	Right-handed alpha
Helix 66	AH3	G	164	178	Right-handed alpha
Helix 67	AH4	G	181	185	Right-handed alpha
Helix 68	AH5	G	236	251	Right-handed alpha
Helix 69	AH6	G	259	265	Right-handed alpha
Helix 70	AH7	H	11	24	Right-handed alpha
Helix 71	AH8	H	44	50	Right-handed alpha
Helix 72	AH9	H	61	69	Right-handed 310
Helix 73	AI1	H	77	92	Right-handed alpha
Helix 74	AI2	H	103	117	Right-handed alpha
Helix 75	AI3	H	126	144	Right-handed alpha
Helix 76	AI4	H	164	178	Right-handed alpha
Helix 77	AI5	H	181	185	Right-handed alpha
Helix 78	AI6	H	236	251	Right-handed alpha
Helix 79	AI7	H	259	265	Right-handed alpha
Helix 80	AI8	I	11	24	Right-handed alpha
Helix 81	AI9	I	44	50	Right-handed alpha
Helix 82	AJ1	I	61	69	Right-handed 310
Helix 83	AJ2	I	77	92	Right-handed alpha
Helix 84	AJ3	I	103	114	Right-handed alpha
Helix 85	AJ4	I	126	144	Right-handed alpha
Helix 86	AJ5	I	164	178	Right-handed alpha
Helix 87	AJ6	I	181	185	Right-handed alpha
Helix 88	AJ7	I	236	251	Right-handed alpha
Helix 89	AJ8	I	259	265	Right-handed alpha
Helix 90	AJ9	J	11	24	Right-handed alpha
Helix 91	AK1	J	44	50	Right-handed alpha
Helix 92	AK2	J	61	69	Right-handed 310
Helix 93	AK3	J	77	92	Right-handed alpha
Helix 94	AK4	J	103	117	Right-handed alpha
Helix 95	AK5	J	126	144	Right-handed alpha
Helix 96	AK6	J	164	178	Right-handed alpha
Helix 97	AK7	J	181	185	Right-handed alpha
Helix 98	AK8	J	236	251	Right-handed alpha
Helix 99	AK9	J	259	265	Right-handed alpha
Helix 100	AL1	K	11	24	Right-handed alpha
Helix 101	AL2	K	44	50	Right-handed alpha
Helix 102	AL3	K	61	69	Right-handed 310
Helix 103	AL4	K	77	92	Right-handed alpha
Helix 104	AL5	K	103	114	Right-handed alpha
Helix 105	AL6	K	126	144	Right-handed alpha
Helix 106	AL7	K	164	178	Right-handed alpha
Helix 107	AL8	K	181	185	Right-handed alpha
Helix 108	AL9	K	236	251	Right-handed alpha
Helix 109	AM1	K	259	265	Right-handed alpha
Helix 110	AM2	L	12	24	Right-handed alpha
Helix 111	AM3	L	61	66	Right-handed 310
Helix 112	AM4	L	77	92	Right-handed alpha
Helix 113	AM5	L	104	113	Right-handed alpha
Helix 114	AM6	L	126	144	Right-handed alpha
Helix 115	AM7	L	164	178	Right-handed alpha
Helix 116	AM8	L	181	185	Right-handed alpha
Helix 117	AM9	L	236	251	Right-handed alpha
Helix 118	AN1	L	259	265	Right-handed alpha

There are 30 sheets in PDB entry 5US6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	59	first strand
Strand 2	A	27	33	parallel
Strand 3	A	2	7	parallel
Strand 4	A	71	74	parallel
Strand 5	A	94	97	parallel
Strand 6	A	118	121	parallel
Strand 7	A	256	258	parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	187	first strand
Strand 2	A	202	208	parallel
Strand 3	A	148	155	parallel
Strand 4	A	215	221	anti-parallel
Strand 5	A	225	233	anti-parallel
Strand 6	B	225	233	anti-parallel
Strand 7	B	215	221	anti-parallel
Strand 8	B	148	155	anti-parallel
Strand 9	B	202	208	parallel
Strand 10	B	186	187	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	162	first strand
Strand 2	C	192	193	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	193	first strand
Strand 2	C	161	162	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	59	first strand
Strand 2	B	27	33	parallel
Strand 3	B	2	7	parallel
Strand 4	B	71	74	parallel
Strand 5	B	94	97	parallel
Strand 6	B	118	121	parallel
Strand 7	B	256	258	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	162	first strand
Strand 2	D	192	193	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	193	first strand
Strand 2	D	161	162	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	59	first strand
Strand 2	C	27	33	parallel
Strand 3	C	2	7	parallel
Strand 4	C	71	74	parallel
Strand 5	C	94	97	parallel
Strand 6	C	118	121	parallel
Strand 7	C	256	258	parallel

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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	187	first strand
Strand 2	C	202	208	parallel
Strand 3	C	148	155	parallel
Strand 4	C	214	221	anti-parallel
Strand 5	C	225	233	anti-parallel
Strand 6	D	225	233	anti-parallel
Strand 7	D	215	221	anti-parallel
Strand 8	D	148	155	anti-parallel
Strand 9	D	202	208	parallel
Strand 10	D	186	187	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	59	first strand
Strand 2	D	27	33	parallel
Strand 3	D	2	7	parallel
Strand 4	D	71	74	parallel
Strand 5	D	94	97	parallel
Strand 6	D	118	121	parallel
Strand 7	D	256	258	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	59	first strand
Strand 2	E	27	33	parallel
Strand 3	E	2	7	parallel
Strand 4	E	71	74	parallel
Strand 5	E	94	97	parallel
Strand 6	E	118	121	parallel
Strand 7	E	256	258	parallel

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There are 10 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	187	first strand
Strand 2	E	202	208	parallel
Strand 3	E	148	155	parallel
Strand 4	E	214	221	anti-parallel
Strand 5	E	225	233	anti-parallel
Strand 6	F	225	233	anti-parallel
Strand 7	F	215	221	anti-parallel
Strand 8	F	148	155	anti-parallel
Strand 9	F	202	208	parallel
Strand 10	F	186	187	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	161	162	first strand
Strand 2	G	192	193	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	192	193	first strand
Strand 2	G	161	162	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	59	first strand
Strand 2	F	27	33	parallel
Strand 3	F	2	7	parallel
Strand 4	F	71	74	parallel
Strand 5	F	94	97	parallel
Strand 6	F	118	121	parallel
Strand 7	F	256	258	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	161	162	first strand
Strand 2	H	192	193	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	192	193	first strand
Strand 2	H	161	162	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	58	59	first strand
Strand 2	G	27	33	parallel
Strand 3	G	2	7	parallel
Strand 4	G	71	74	parallel
Strand 5	G	94	97	parallel
Strand 6	G	118	121	parallel
Strand 7	G	256	258	parallel

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There are 10 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	186	187	first strand
Strand 2	G	202	208	parallel
Strand 3	G	148	155	parallel
Strand 4	G	215	221	anti-parallel
Strand 5	G	225	233	anti-parallel
Strand 6	H	225	233	anti-parallel
Strand 7	H	215	221	anti-parallel
Strand 8	H	148	155	anti-parallel
Strand 9	H	202	208	parallel
Strand 10	H	186	187	parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	27	32	first strand
Strand 2	H	2	7	parallel
Strand 3	H	71	74	parallel
Strand 4	H	94	97	parallel
Strand 5	H	118	121	parallel
Strand 6	H	256	258	parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	58	59	first strand
Strand 2	I	27	33	parallel
Strand 3	I	2	7	parallel
Strand 4	I	71	74	parallel
Strand 5	I	94	97	parallel
Strand 6	I	118	121	parallel
Strand 7	I	256	258	parallel

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There are 10 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	186	187	first strand
Strand 2	I	202	208	parallel
Strand 3	I	148	155	parallel
Strand 4	I	214	221	anti-parallel
Strand 5	I	225	233	anti-parallel
Strand 6	J	225	233	anti-parallel
Strand 7	J	215	221	anti-parallel
Strand 8	J	148	155	anti-parallel
Strand 9	J	202	208	parallel
Strand 10	J	186	187	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	161	162	first strand
Strand 2	K	192	193	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	192	193	first strand
Strand 2	K	161	162	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	58	59	first strand
Strand 2	J	27	33	parallel
Strand 3	J	2	7	parallel
Strand 4	J	71	74	parallel
Strand 5	J	94	97	parallel
Strand 6	J	118	121	parallel
Strand 7	J	256	258	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	161	162	first strand
Strand 2	L	192	193	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	192	193	first strand
Strand 2	L	161	162	anti-parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	58	59	first strand
Strand 2	K	27	33	parallel
Strand 3	K	2	7	parallel
Strand 4	K	71	74	parallel
Strand 5	K	94	97	parallel
Strand 6	K	118	121	parallel
Strand 7	K	256	258	parallel

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There are 10 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	186	187	first strand
Strand 2	K	202	208	parallel
Strand 3	K	148	155	parallel
Strand 4	K	215	221	anti-parallel
Strand 5	K	225	233	anti-parallel
Strand 6	L	225	233	anti-parallel
Strand 7	L	214	221	anti-parallel
Strand 8	L	148	155	anti-parallel
Strand 9	L	202	208	parallel
Strand 10	L	186	187	parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	28	29	first strand
Strand 2	L	3	6	parallel
Strand 3	L	71	74	parallel
Strand 4	L	94	97	parallel
Strand 5	L	118	121	parallel
Strand 6	L	256	258	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5US6

Analysis of interatomic Contacts of Structural Units in PDB entry:
5US6