Analysis of interatomic Contacts of Structural Units in PDB entry:
5USX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5USX entry

There are 2 chains in PDB entry 5USX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ASN 317
B
 MET 4ASN 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5USX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 27Right-handed alpha
Helix 2
AA2
A
42 47Right-handed 310
Helix 3
AA3
A
61 76Right-handed alpha
Helix 4
AA4
A
122 128Right-handed alpha
Helix 5
AA5
A
136 141Right-handed alpha
Helix 6
AA6
A
142 145Right-handed 310
Helix 7
AA7
A
155 166Right-handed alpha
Helix 8
AA8
A
184 198Right-handed alpha
Helix 9
AA9
A
249 253Right-handed 310
Helix 10
AB1
A
285 288Right-handed 310
Helix 11
AB2
A
294 315Right-handed alpha
Helix 12
AB3
B
15 27Right-handed alpha
Helix 13
AB4
B
41 47Right-handed 310
Helix 14
AB5
B
61 76Right-handed alpha
Helix 15
AB6
B
122 128Right-handed alpha
Helix 16
AB7
B
141 145Right-handed 310
Helix 17
AB8
B
155 165Right-handed alpha
Helix 18
AB9
B
184 197Right-handed alpha
Helix 19
AC1
B
249 253Right-handed 310
Helix 20
AC2
B
285 288Right-handed 310
Helix 21
AC3
B
294 315Right-handed alpha
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There are 12 sheets in PDB entry 5USX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 81first strand
Strand 2
A
33 35parallel
Strand 3
A
5 12parallel
Strand 4
A
103 111parallel
Strand 5
A
95 99anti-parallel
Strand 6
A
85 89anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 81first strand
Strand 2
A
33 35parallel
Strand 3
A
5 12parallel
Strand 4
A
103 111parallel
Strand 5
A
281 283parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 117first strand
Strand 2
A
245 247anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 134first strand
Strand 2
A
238 241parallel
Strand 3
A
148 152parallel
Strand 4
A
171 175parallel
Strand 5
A
200 203parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 214first strand
Strand 2
A
217 225anti-parallel
Strand 3
A
231 234anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 259first strand
Strand 2
A
262 263anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 81first strand
Strand 2
B
33 35parallel
Strand 3
B
5 12parallel
Strand 4
B
103 111parallel
Strand 5
B
95 99anti-parallel
Strand 6
B
85 89anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 81first strand
Strand 2
B
33 35parallel
Strand 3
B
5 12parallel
Strand 4
B
103 111parallel
Strand 5
B
281 283parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 117first strand
Strand 2
B
245 247anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 134first strand
Strand 2
B
238 241parallel
Strand 3
B
148 152parallel
Strand 4
B
171 175parallel
Strand 5
B
200 203parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 214first strand
Strand 2
B
217 225anti-parallel
Strand 3
B
231 234anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 259first strand
Strand 2
B
262 263anti-parallel
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