Analysis of interatomic Contacts of Structural Units in PDB entry:
5UTU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5UTU entry

There are 3 chains in PDB entry 5UTU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 2	TYR 495
B	LYS 2	TYR 495
C	LYS 2	ILE 271

There are200 helices in PDB entry 5UTU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	11	Right-handed 310
Helix 2	AA2	A	12	24	Right-handed alpha
Helix 3	AA3	A	27	38	Right-handed alpha
Helix 4	AA4	A	55	68	Right-handed alpha
Helix 5	AA5	A	83	93	Right-handed alpha
Helix 6	AA6	A	105	118	Right-handed alpha
Helix 7	AA7	A	139	159	Right-handed alpha
Helix 8	AA8	A	162	166	Right-handed 310
Helix 9	AA9	A	177	194	Right-handed alpha
Helix 10	AB1	A	196	203	Right-handed alpha
Helix 11	AB2	A	212	225	Right-handed alpha
Helix 12	AB3	A	238	243	Right-handed alpha
Helix 13	AB4	A	244	262	Right-handed alpha
Helix 14	AB5	A	277	290	Right-handed alpha
Helix 15	AB6	A	300	310	Right-handed alpha
Helix 16	AB7	A	316	321	Right-handed alpha
Helix 17	AB8	A	338	345	Right-handed alpha
Helix 18	AB9	A	362	368	Right-handed alpha
Helix 19	AC1	A	398	400	Right-handed 310
Helix 20	AC2	A	401	406	Right-handed alpha
Helix 21	AC3	A	411	432	Right-handed alpha
Helix 22	AC4	A	433	436	Right-handed 310
Helix 23	AC5	A	450	461	Right-handed alpha
Helix 24	AC6	A	462	466	Right-handed 310
Helix 25	AC7	A	473	480	Right-handed alpha
Helix 26	AC8	B	9	11	Right-handed 310
Helix 27	AC9	B	12	24	Right-handed alpha
Helix 28	AD1	B	27	38	Right-handed alpha
Helix 29	AD2	B	55	68	Right-handed alpha
Helix 30	AD3	B	83	93	Right-handed alpha
Helix 31	AD4	B	105	118	Right-handed alpha
Helix 32	AD5	B	139	159	Right-handed alpha
Helix 33	AD6	B	162	166	Right-handed 310
Helix 34	AD7	B	177	194	Right-handed alpha
Helix 35	AD8	B	196	203	Right-handed alpha
Helix 36	AD9	B	212	225	Right-handed alpha
Helix 37	AE1	B	238	243	Right-handed alpha
Helix 38	AE2	B	244	262	Right-handed alpha
Helix 39	AE3	B	277	290	Right-handed alpha
Helix 40	AE4	B	300	310	Right-handed alpha
Helix 41	AE5	B	316	321	Right-handed alpha
Helix 42	AE6	B	338	345	Right-handed alpha
Helix 43	AE7	B	362	368	Right-handed alpha
Helix 44	AE8	B	398	400	Right-handed 310
Helix 45	AE9	B	401	406	Right-handed alpha
Helix 46	AF1	B	411	432	Right-handed alpha
Helix 47	AF2	B	433	436	Right-handed 310
Helix 48	AF3	B	450	462	Right-handed alpha
Helix 49	AF4	B	463	466	Right-handed 310
Helix 50	AF5	B	473	480	Right-handed alpha
Helix 51	AF6	C	9	11	Right-handed 310
Helix 52	AF7	C	12	24	Right-handed alpha
Helix 53	AF8	C	27	38	Right-handed alpha
Helix 54	AF9	C	55	68	Right-handed alpha
Helix 55	AG1	C	83	93	Right-handed alpha
Helix 56	AG2	C	105	118	Right-handed alpha
Helix 57	AG3	C	139	159	Right-handed alpha
Helix 58	AG4	C	162	166	Right-handed 310
Helix 59	AG5	C	177	194	Right-handed alpha
Helix 60	AG6	C	196	203	Right-handed alpha
Helix 61	AG7	C	212	225	Right-handed alpha
Helix 62	AG8	C	238	243	Right-handed alpha
Helix 63	AG9	C	244	262	Right-handed alpha
Helix 64	AH1	C	277	290	Right-handed alpha
Helix 65	AH2	C	300	310	Right-handed alpha
Helix 66	AH3	C	316	321	Right-handed alpha
Helix 67	AH4	C	338	345	Right-handed alpha
Helix 68	AH5	C	362	368	Right-handed alpha
Helix 69	AH6	C	398	400	Right-handed 310
Helix 70	AH7	C	401	406	Right-handed alpha
Helix 71	AH8	C	411	432	Right-handed alpha
Helix 72	AH9	C	433	436	Right-handed 310
Helix 73	AI1	C	450	462	Right-handed alpha
Helix 74	AI2	C	463	466	Right-handed 310
Helix 75	AI3	C	473	480	Right-handed alpha
Helix 76	AI4	D	9	11	Right-handed 310
Helix 77	AI5	D	12	24	Right-handed alpha
Helix 78	AI6	D	27	38	Right-handed alpha
Helix 79	AI7	D	55	68	Right-handed alpha
Helix 80	AI8	D	83	93	Right-handed alpha
Helix 81	AI9	D	105	118	Right-handed alpha
Helix 82	AJ1	D	139	159	Right-handed alpha
Helix 83	AJ2	D	162	166	Right-handed 310
Helix 84	AJ3	D	177	194	Right-handed alpha
Helix 85	AJ4	D	196	203	Right-handed alpha
Helix 86	AJ5	D	212	225	Right-handed alpha
Helix 87	AJ6	D	238	243	Right-handed alpha
Helix 88	AJ7	D	244	262	Right-handed alpha
Helix 89	AJ8	D	277	290	Right-handed alpha
Helix 90	AJ9	D	300	310	Right-handed alpha
Helix 91	AK1	D	316	321	Right-handed alpha
Helix 92	AK2	D	338	345	Right-handed alpha
Helix 93	AK3	D	362	368	Right-handed alpha
Helix 94	AK4	D	398	400	Right-handed 310
Helix 95	AK5	D	401	406	Right-handed alpha
Helix 96	AK6	D	411	432	Right-handed alpha
Helix 97	AK7	D	433	436	Right-handed 310
Helix 98	AK8	D	450	462	Right-handed alpha
Helix 99	AK9	D	463	466	Right-handed 310
Helix 100	AL1	D	473	480	Right-handed alpha
Helix 101	AL2	E	9	11	Right-handed 310
Helix 102	AL3	E	12	24	Right-handed alpha
Helix 103	AL4	E	27	38	Right-handed alpha
Helix 104	AL5	E	55	68	Right-handed alpha
Helix 105	AL6	E	83	93	Right-handed alpha
Helix 106	AL7	E	105	118	Right-handed alpha
Helix 107	AL8	E	139	159	Right-handed alpha
Helix 108	AL9	E	162	166	Right-handed 310
Helix 109	AM1	E	177	194	Right-handed alpha
Helix 110	AM2	E	196	203	Right-handed alpha
Helix 111	AM3	E	212	225	Right-handed alpha
Helix 112	AM4	E	238	243	Right-handed alpha
Helix 113	AM5	E	244	262	Right-handed alpha
Helix 114	AM6	E	277	290	Right-handed alpha
Helix 115	AM7	E	300	310	Right-handed alpha
Helix 116	AM8	E	316	321	Right-handed alpha
Helix 117	AM9	E	338	345	Right-handed alpha
Helix 118	AN1	E	362	368	Right-handed alpha
Helix 119	AN2	E	398	400	Right-handed 310
Helix 120	AN3	E	401	406	Right-handed alpha
Helix 121	AN4	E	411	432	Right-handed alpha
Helix 122	AN5	E	433	436	Right-handed 310
Helix 123	AN6	E	450	462	Right-handed alpha
Helix 124	AN7	E	463	466	Right-handed 310
Helix 125	AN8	E	473	480	Right-handed alpha
Helix 126	AN9	F	9	11	Right-handed 310
Helix 127	AO1	F	12	24	Right-handed alpha
Helix 128	AO2	F	27	38	Right-handed alpha
Helix 129	AO3	F	55	68	Right-handed alpha
Helix 130	AO4	F	83	93	Right-handed alpha
Helix 131	AO5	F	105	118	Right-handed alpha
Helix 132	AO6	F	139	159	Right-handed alpha
Helix 133	AO7	F	162	166	Right-handed 310
Helix 134	AO8	F	177	194	Right-handed alpha
Helix 135	AO9	F	196	203	Right-handed alpha
Helix 136	AP1	F	212	225	Right-handed alpha
Helix 137	AP2	F	238	243	Right-handed alpha
Helix 138	AP3	F	244	262	Right-handed alpha
Helix 139	AP4	F	277	290	Right-handed alpha
Helix 140	AP5	F	300	310	Right-handed alpha
Helix 141	AP6	F	316	321	Right-handed alpha
Helix 142	AP7	F	338	345	Right-handed alpha
Helix 143	AP8	F	362	368	Right-handed alpha
Helix 144	AP9	F	398	400	Right-handed 310
Helix 145	AQ1	F	401	406	Right-handed alpha
Helix 146	AQ2	F	411	432	Right-handed alpha
Helix 147	AQ3	F	433	436	Right-handed 310
Helix 148	AQ4	F	450	461	Right-handed alpha
Helix 149	AQ5	F	462	466	Right-handed 310
Helix 150	AQ6	F	473	480	Right-handed alpha
Helix 151	AQ7	G	9	11	Right-handed 310
Helix 152	AQ8	G	12	24	Right-handed alpha
Helix 153	AQ9	G	27	38	Right-handed alpha
Helix 154	AR1	G	55	68	Right-handed alpha
Helix 155	AR2	G	83	93	Right-handed alpha
Helix 156	AR3	G	105	118	Right-handed alpha
Helix 157	AR4	G	139	159	Right-handed alpha
Helix 158	AR5	G	162	166	Right-handed 310
Helix 159	AR6	G	177	194	Right-handed alpha
Helix 160	AR7	G	196	203	Right-handed alpha
Helix 161	AR8	G	212	225	Right-handed alpha
Helix 162	AR9	G	238	243	Right-handed alpha
Helix 163	AS1	G	244	262	Right-handed alpha
Helix 164	AS2	G	277	290	Right-handed alpha
Helix 165	AS3	G	300	310	Right-handed alpha
Helix 166	AS4	G	316	321	Right-handed alpha
Helix 167	AS5	G	338	345	Right-handed alpha
Helix 168	AS6	G	362	368	Right-handed alpha
Helix 169	AS7	G	398	400	Right-handed 310
Helix 170	AS8	G	401	406	Right-handed alpha
Helix 171	AS9	G	411	432	Right-handed alpha
Helix 172	AT1	G	433	436	Right-handed 310
Helix 173	AT2	G	450	461	Right-handed alpha
Helix 174	AT3	G	462	466	Right-handed 310
Helix 175	AT4	G	473	480	Right-handed alpha
Helix 176	AT5	H	9	11	Right-handed 310
Helix 177	AT6	H	12	24	Right-handed alpha
Helix 178	AT7	H	27	38	Right-handed alpha
Helix 179	AT8	H	55	68	Right-handed alpha
Helix 180	AT9	H	83	93	Right-handed alpha
Helix 181	AU1	H	105	118	Right-handed alpha
Helix 182	AU2	H	139	159	Right-handed alpha
Helix 183	AU3	H	162	166	Right-handed 310
Helix 184	AU4	H	177	194	Right-handed alpha
Helix 185	AU5	H	196	203	Right-handed alpha
Helix 186	AU6	H	212	225	Right-handed alpha
Helix 187	AU7	H	238	243	Right-handed alpha
Helix 188	AU8	H	244	262	Right-handed alpha
Helix 189	AU9	H	277	290	Right-handed alpha
Helix 190	AV1	H	300	310	Right-handed alpha
Helix 191	AV2	H	316	321	Right-handed alpha
Helix 192	AV3	H	338	345	Right-handed alpha
Helix 193	AV4	H	362	368	Right-handed alpha
Helix 194	AV5	H	398	400	Right-handed 310
Helix 195	AV6	H	401	406	Right-handed alpha
Helix 196	AV7	H	411	432	Right-handed alpha
Helix 197	AV8	H	433	436	Right-handed 310
Helix 198	AV9	H	450	462	Right-handed alpha
Helix 199	AW1	H	463	466	Right-handed 310
Helix 200	AW2	H	473	480	Right-handed alpha

There are 22 sheets in PDB entry 5UTU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	99	first strand
Strand 2	A	71	75	parallel
Strand 3	A	47	51	parallel
Strand 4	A	133	136	parallel
Strand 5	A	207	210	parallel
Strand 6	A	232	234	parallel
Strand 7	A	446	447	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	120	first strand
Strand 2	A	128	129	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	314	first strand
Strand 2	A	293	297	parallel
Strand 3	A	270	274	parallel
Strand 4	A	326	329	parallel
Strand 5	A	349	353	parallel
Strand 6	A	392	396	parallel
Strand 7	A	381	385	anti-parallel
Strand 8	A	373	378	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	99	first strand
Strand 2	B	71	75	parallel
Strand 3	B	47	51	parallel
Strand 4	B	133	136	parallel
Strand 5	B	207	210	parallel
Strand 6	B	232	234	parallel
Strand 7	B	446	447	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	120	first strand
Strand 2	B	128	129	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	314	first strand
Strand 2	B	293	297	parallel
Strand 3	B	270	274	parallel
Strand 4	B	326	329	parallel
Strand 5	B	349	353	parallel
Strand 6	B	392	396	parallel
Strand 7	B	381	385	anti-parallel
Strand 8	B	373	378	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	99	first strand
Strand 2	C	71	75	parallel
Strand 3	C	47	51	parallel
Strand 4	C	133	136	parallel
Strand 5	C	207	210	parallel
Strand 6	C	232	234	parallel
Strand 7	C	446	447	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	120	first strand
Strand 2	C	128	129	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	314	first strand
Strand 2	C	293	297	parallel
Strand 3	C	270	274	parallel
Strand 4	C	326	329	parallel
Strand 5	C	349	353	parallel
Strand 6	C	392	396	parallel
Strand 7	C	381	385	anti-parallel
Strand 8	C	373	378	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	97	99	first strand
Strand 2	D	71	75	parallel
Strand 3	D	47	51	parallel
Strand 4	D	133	136	parallel
Strand 5	D	207	210	parallel
Strand 6	D	232	234	parallel
Strand 7	D	446	447	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	120	first strand
Strand 2	D	128	129	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	314	first strand
Strand 2	D	293	297	parallel
Strand 3	D	270	274	parallel
Strand 4	D	326	329	parallel
Strand 5	D	349	353	parallel
Strand 6	D	392	396	parallel
Strand 7	D	381	385	anti-parallel
Strand 8	D	373	378	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	97	99	first strand
Strand 2	E	71	75	parallel
Strand 3	E	47	51	parallel
Strand 4	E	133	136	parallel
Strand 5	E	207	210	parallel
Strand 6	E	232	234	parallel
Strand 7	E	446	447	parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	313	314	first strand
Strand 2	E	293	297	parallel
Strand 3	E	270	274	parallel
Strand 4	E	326	329	parallel
Strand 5	E	349	353	parallel
Strand 6	E	392	396	parallel
Strand 7	E	381	385	anti-parallel
Strand 8	E	373	378	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	97	99	first strand
Strand 2	F	71	75	parallel
Strand 3	F	47	51	parallel
Strand 4	F	133	136	parallel
Strand 5	F	207	210	parallel
Strand 6	F	232	234	parallel
Strand 7	F	446	447	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	119	120	first strand
Strand 2	F	128	129	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	313	314	first strand
Strand 2	F	293	297	parallel
Strand 3	F	270	274	parallel
Strand 4	F	326	329	parallel
Strand 5	F	349	353	parallel
Strand 6	F	392	396	parallel
Strand 7	F	381	385	anti-parallel
Strand 8	F	373	378	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	97	99	first strand
Strand 2	G	71	75	parallel
Strand 3	G	47	51	parallel
Strand 4	G	133	136	parallel
Strand 5	G	207	210	parallel
Strand 6	G	232	234	parallel
Strand 7	G	446	447	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	119	120	first strand
Strand 2	G	128	129	anti-parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	313	314	first strand
Strand 2	G	293	297	parallel
Strand 3	G	270	274	parallel
Strand 4	G	326	329	parallel
Strand 5	G	349	353	parallel
Strand 6	G	392	396	parallel
Strand 7	G	381	385	anti-parallel
Strand 8	G	373	378	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	97	99	first strand
Strand 2	H	71	75	parallel
Strand 3	H	47	51	parallel
Strand 4	H	133	136	parallel
Strand 5	H	207	210	parallel
Strand 6	H	232	234	parallel
Strand 7	H	446	447	parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	313	314	first strand
Strand 2	H	293	297	parallel
Strand 3	H	270	274	parallel
Strand 4	H	326	329	parallel
Strand 5	H	349	353	parallel
Strand 6	H	392	396	parallel
Strand 7	H	381	385	anti-parallel
Strand 8	H	373	378	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5UTU

Analysis of interatomic Contacts of Structural Units in PDB entry:
5UTU