Analysis of interatomic Contacts of Structural Units in PDB entry:
5UTZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5UTZ entry

There are 7 chains in PDB entry 5UTZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	LEU 2	CYS 224
L	ASN 1	CYS 215
D	SER 5	THR 133
B	LEU 2	CYS 224
C	ASN 1	THR 213
A	ALA 1	THR 133
F	LEU 2	VAL 177

There are 62 helices in PDB entry 5UTZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	H	88	92	Right-handed 310
Helix 2	AA2	H	164	166	Right-handed 310
Helix 3	AA3	H	195	197	Right-handed 310
Helix 4	AA4	H	209	212	Right-handed 310
Helix 5	AA5	L	28	32	Right-handed 310
Helix 6	AA6	L	82	86	Right-handed 310
Helix 7	AA7	L	125	130	Right-handed alpha
Helix 8	AA8	L	185	191	Right-handed alpha
Helix 9	AA9	D	6	30	Right-handed alpha
Helix 10	AB1	D	33	35	Right-handed 310
Helix 11	AB2	D	36	42	Right-handed alpha
Helix 12	AB3	D	52	55	Right-handed 310
Helix 13	AB4	D	56	62	Right-handed alpha
Helix 14	AB5	D	62	73	Right-handed alpha
Helix 15	AB6	D	81	98	Right-handed alpha
Helix 16	AB7	D	113	133	Right-handed alpha
Helix 17	AB8	B	88	92	Right-handed 310
Helix 18	AB9	B	164	166	Right-handed 310
Helix 19	AC1	B	195	197	Right-handed 310
Helix 20	AC2	B	209	212	Right-handed 310
Helix 21	AC3	C	28	32	Right-handed 310
Helix 22	AC4	C	82	86	Right-handed 310
Helix 23	AC5	C	125	130	Right-handed alpha
Helix 24	AC6	C	185	191	Right-handed alpha
Helix 25	AC7	A	4	31	Right-handed alpha
Helix 26	AC8	A	35	41	Right-handed alpha
Helix 27	AC9	A	52	55	Right-handed 310
Helix 28	AD1	A	56	61	Right-handed alpha
Helix 29	AD2	A	62	73	Right-handed alpha
Helix 30	AD3	A	81	98	Right-handed alpha
Helix 31	AD4	A	113	133	Right-handed alpha
Helix 32	AD5	F	88	92	Right-handed 310
Helix 33	AD6	F	164	166	Right-handed 310
Helix 34	AD7	F	195	197	Right-handed 310
Helix 35	AD8	F	209	212	Right-handed 310
Helix 36	AD9	G	28	32	Right-handed 310
Helix 37	AE1	G	82	86	Right-handed 310
Helix 38	AE2	G	125	131	Right-handed alpha
Helix 39	AE3	G	185	191	Right-handed alpha
Helix 40	AE4	E	7	30	Right-handed alpha
Helix 41	AE5	E	33	35	Right-handed 310
Helix 42	AE6	E	36	42	Right-handed alpha
Helix 43	AE7	E	52	55	Right-handed 310
Helix 44	AE8	E	56	61	Right-handed alpha
Helix 45	AE9	E	62	73	Right-handed alpha
Helix 46	AF1	E	81	98	Right-handed alpha
Helix 47	AF2	E	113	133	Right-handed alpha
Helix 48	AF3	J	88	92	Right-handed 310
Helix 49	AF4	J	164	166	Right-handed 310
Helix 50	AF5	J	195	197	Right-handed 310
Helix 51	AF6	J	209	212	Right-handed 310
Helix 52	AF7	K	28	32	Right-handed 310
Helix 53	AF8	K	82	86	Right-handed 310
Helix 54	AF9	K	125	131	Right-handed alpha
Helix 55	AG1	K	185	192	Right-handed alpha
Helix 56	AG2	I	5	31	Right-handed alpha
Helix 57	AG3	I	35	41	Right-handed alpha
Helix 58	AG4	I	52	55	Right-handed 310
Helix 59	AG5	I	56	61	Right-handed alpha
Helix 60	AG6	I	62	73	Right-handed alpha
Helix 61	AG7	I	81	98	Right-handed alpha
Helix 62	AG8	I	113	133	Right-handed alpha

There are 46 sheets in PDB entry 5UTZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	79	84	anti-parallel
Strand 4	H	69	74	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	115	119	parallel
Strand 3	H	93	101	anti-parallel
Strand 4	H	34	41	anti-parallel
Strand 5	H	47	53	anti-parallel
Strand 6	H	59	61	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	128	132	first strand
Strand 2	H	143	153	anti-parallel
Strand 3	H	184	193	anti-parallel
Strand 4	H	171	173	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	128	132	first strand
Strand 2	H	143	153	anti-parallel
Strand 3	H	184	193	anti-parallel
Strand 4	H	177	178	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	159	162	first strand
Strand 2	H	203	208	anti-parallel
Strand 3	H	213	218	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	5	first strand
Strand 2	L	18	24	anti-parallel
Strand 3	L	73	78	anti-parallel
Strand 4	L	63	68	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	105	109	parallel
Strand 3	L	87	94	anti-parallel
Strand 4	L	35	39	anti-parallel
Strand 5	L	46	49	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	105	109	parallel
Strand 3	L	87	94	anti-parallel
Strand 4	L	99	101	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	118	122	first strand
Strand 2	L	134	143	anti-parallel
Strand 3	L	176	184	anti-parallel
Strand 4	L	163	165	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	118	122	first strand
Strand 2	L	134	143	anti-parallel
Strand 3	L	176	184	anti-parallel
Strand 4	L	169	170	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	157	159	first strand
Strand 2	L	149	154	anti-parallel
Strand 3	L	195	201	anti-parallel
Strand 4	L	204	210	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	7	first strand
Strand 2	B	18	25	anti-parallel
Strand 3	B	79	84	anti-parallel
Strand 4	B	69	74	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	12	first strand
Strand 2	B	115	119	parallel
Strand 3	B	93	101	anti-parallel
Strand 4	B	34	41	anti-parallel
Strand 5	B	47	53	anti-parallel
Strand 6	B	59	61	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	132	first strand
Strand 2	B	143	153	anti-parallel
Strand 3	B	184	193	anti-parallel
Strand 4	B	171	173	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	132	first strand
Strand 2	B	143	153	anti-parallel
Strand 3	B	184	193	anti-parallel
Strand 4	B	177	178	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	162	first strand
Strand 2	B	203	208	anti-parallel
Strand 3	B	213	218	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	5	first strand
Strand 2	C	18	24	anti-parallel
Strand 3	C	73	78	anti-parallel
Strand 4	C	63	68	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	9	12	first strand
Strand 2	C	105	109	parallel
Strand 3	C	87	94	anti-parallel
Strand 4	C	35	39	anti-parallel
Strand 5	C	46	49	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	9	12	first strand
Strand 2	C	105	109	parallel
Strand 3	C	87	94	anti-parallel
Strand 4	C	99	101	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	122	first strand
Strand 2	C	134	143	anti-parallel
Strand 3	C	176	184	anti-parallel
Strand 4	C	163	165	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	122	first strand
Strand 2	C	134	143	anti-parallel
Strand 3	C	176	184	anti-parallel
Strand 4	C	169	170	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	159	first strand
Strand 2	C	149	154	anti-parallel
Strand 3	C	195	201	anti-parallel
Strand 4	C	204	210	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	47	first strand
Strand 2	A	107	112	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	7	first strand
Strand 2	F	18	25	anti-parallel
Strand 3	F	79	84	anti-parallel
Strand 4	F	69	74	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	115	119	parallel
Strand 3	F	93	101	anti-parallel
Strand 4	F	34	41	anti-parallel
Strand 5	F	47	53	anti-parallel
Strand 6	F	59	61	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	128	132	first strand
Strand 2	F	143	153	anti-parallel
Strand 3	F	184	193	anti-parallel
Strand 4	F	171	173	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	128	132	first strand
Strand 2	F	143	153	anti-parallel
Strand 3	F	184	193	anti-parallel
Strand 4	F	177	178	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	159	162	first strand
Strand 2	F	203	208	anti-parallel
Strand 3	F	213	218	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	4	5	first strand
Strand 2	G	18	24	anti-parallel
Strand 3	G	73	78	anti-parallel
Strand 4	G	63	68	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	9	12	first strand
Strand 2	G	105	109	parallel
Strand 3	G	88	94	anti-parallel
Strand 4	G	35	39	anti-parallel
Strand 5	G	46	49	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	9	12	first strand
Strand 2	G	105	109	parallel
Strand 3	G	88	94	anti-parallel
Strand 4	G	99	101	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	118	122	first strand
Strand 2	G	134	143	anti-parallel
Strand 3	G	176	184	anti-parallel
Strand 4	G	163	165	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	118	122	first strand
Strand 2	G	134	143	anti-parallel
Strand 3	G	176	184	anti-parallel
Strand 4	G	169	170	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	157	159	first strand
Strand 2	G	149	154	anti-parallel
Strand 3	G	195	201	anti-parallel
Strand 4	G	204	210	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	47	first strand
Strand 2	E	107	112	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	3	7	first strand
Strand 2	J	18	25	anti-parallel
Strand 3	J	79	84	anti-parallel
Strand 4	J	69	74	anti-parallel

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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	11	12	first strand
Strand 2	J	115	119	parallel
Strand 3	J	93	101	anti-parallel
Strand 4	J	34	41	anti-parallel
Strand 5	J	47	53	anti-parallel
Strand 6	J	59	61	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	128	132	first strand
Strand 2	J	143	153	anti-parallel
Strand 3	J	184	193	anti-parallel
Strand 4	J	171	178	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	159	162	first strand
Strand 2	J	203	208	anti-parallel
Strand 3	J	213	218	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	4	5	first strand
Strand 2	K	18	24	anti-parallel
Strand 3	K	73	78	anti-parallel
Strand 4	K	63	68	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	9	12	first strand
Strand 2	K	105	109	parallel
Strand 3	K	87	94	anti-parallel
Strand 4	K	35	39	anti-parallel
Strand 5	K	46	49	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	9	12	first strand
Strand 2	K	105	109	parallel
Strand 3	K	87	94	anti-parallel
Strand 4	K	99	101	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	118	122	first strand
Strand 2	K	134	143	anti-parallel
Strand 3	K	176	184	anti-parallel
Strand 4	K	163	165	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	118	122	first strand
Strand 2	K	134	143	anti-parallel
Strand 3	K	176	184	anti-parallel
Strand 4	K	169	170	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	157	159	first strand
Strand 2	K	149	154	anti-parallel
Strand 3	K	195	201	anti-parallel
Strand 4	K	204	210	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	44	47	first strand
Strand 2	I	107	112	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5UTZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
5UTZ