Analysis of interatomic Contacts of Structural Units in PDB entry:
5UUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UUU entry

There is 1 chain in PDB entry 5UUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 31ALA 538
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 5UUU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 38Right-handed 310
Helix 2
AA2
A
39 50Right-handed alpha
Helix 3
AA3
A
54 61Right-handed alpha
Helix 4
AA4
A
61 73Right-handed alpha
Helix 5
AA5
A
159 168Right-handed alpha
Helix 6
AA6
A
168 183Right-handed alpha
Helix 7
AA7
A
187 189Right-handed 310
Helix 8
AA8
A
224 230Right-handed alpha
Helix 9
AA9
A
232 247Right-handed alpha
Helix 10
AB1
A
278 287Right-handed alpha
Helix 11
AB2
A
290 311Right-handed alpha
Helix 12
AB3
A
319 321Right-handed 310
Helix 13
AB4
A
358 363Right-handed alpha
Helix 14
AB5
A
370 387Right-handed alpha
Helix 15
AB6
A
398 408Right-handed alpha
Helix 16
AB7
A
418 429Right-handed alpha
Helix 17
AB8
A
432 436Right-handed 310
Helix 18
AB9
A
443 449Right-handed alpha
Helix 19
AC1
A
450 454Right-handed 310
Helix 20
AC2
A
457 463Right-handed alpha
Helix 21
AC3
A
499 505Right-handed alpha
Helix 22
AC4
A
513 524Right-handed alpha
Helix 23
AC5
A
525 538Right-handed alpha
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There are 3 sheets in PDB entry 5UUU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 199first strand
Strand 2
A
203 210anti-parallel
Strand 3
A
216 223anti-parallel
Strand 4
A
266 271anti-parallel
Strand 5
A
257 262anti-parallel
Strand 6
A
511 512anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 314first strand
Strand 2
A
340 341anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 325first strand
Strand 2
A
331 333anti-parallel
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