Analysis of interatomic Contacts of Structural Units in PDB entry:
5UVG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UVG entry

There is 1 chain in PDB entry 5UVG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 121GLY 651
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5UVG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
135 139Right-handed 310
Helix 2
AA2
A
146 164Right-handed alpha
Helix 3
AA3
A
367 379Right-handed alpha
Helix 4
AA4
A
388 393Right-handed 310
Helix 5
AA5
A
468 490Right-handed alpha
Helix 6
AA6
A
517 519Right-handed 310
Helix 7
AA7
A
520 525Right-handed alpha
Helix 8
AA8
A
527 531Right-handed alpha
Helix 9
AA9
A
564 573Right-handed alpha
Helix 10
AB1
A
574 582Right-handed alpha
Helix 11
AB2
A
595 599Right-handed 310
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There are 3 sheets in PDB entry 5UVG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 350first strand
Strand 2
A
620 630parallel
Strand 3
A
642 650anti-parallel
Strand 4
A
122 133anti-parallel
Strand 5
A
359 365parallel
Strand 6
A
408 411anti-parallel
Strand 7
A
384 386anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 422first strand
Strand 2
A
436 446anti-parallel
Strand 3
A
452 461anti-parallel
Strand 4
A
500 510parallel
Strand 5
A
607 612anti-parallel
Strand 6
A
532 533anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 539first strand
Strand 2
A
542 543anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il