Analysis of interatomic Contacts of Structural Units in PDB entry:
5UWV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5UWV entry

There are 6 chains in PDB entry 5UWV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	PRO 57	ARG 404
A	PRO 57	ARG 404
D	VAL 56	ARG 404
E	VAL 56	GLN 405
C	VAL 56	GLN 405
F	VAL 56	ARG 404

There are 28 helices in PDB entry 5UWV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	177	184	Right-handed alpha
Helix 2	AA2	B	336	339	Right-handed 310
Helix 3	AA3	B	355	366	Right-handed alpha
Helix 4	AA4	B	389	393	Right-handed 310
Helix 5	AA5	B	394	401	Right-handed alpha
Helix 6	AA6	A	177	184	Right-handed alpha
Helix 7	AA7	A	336	339	Right-handed 310
Helix 8	AA8	A	355	366	Right-handed alpha
Helix 9	AA9	A	389	393	Right-handed 310
Helix 10	AB1	A	394	401	Right-handed alpha
Helix 11	AB2	D	177	184	Right-handed alpha
Helix 12	AB3	D	336	339	Right-handed 310
Helix 13	AB4	D	356	366	Right-handed alpha
Helix 14	AB5	D	389	393	Right-handed 310
Helix 15	AB6	D	394	401	Right-handed alpha
Helix 16	AB7	E	177	184	Right-handed alpha
Helix 17	AB8	E	355	366	Right-handed alpha
Helix 18	AB9	E	394	401	Right-handed alpha
Helix 19	AC1	C	177	184	Right-handed alpha
Helix 20	AC2	C	336	339	Right-handed 310
Helix 21	AC3	C	355	366	Right-handed alpha
Helix 22	AC4	C	383	387	Right-handed 310
Helix 23	AC5	C	394	401	Right-handed alpha
Helix 24	AC6	F	177	184	Right-handed alpha
Helix 25	AC7	F	338	342	Right-handed 310
Helix 26	AC8	F	355	366	Right-handed alpha
Helix 27	AC9	F	389	393	Right-handed 310
Helix 28	AD1	F	394	401	Right-handed alpha

There are 44 sheets in PDB entry 5UWV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	61	first strand
Strand 2	B	77	81	anti-parallel
Strand 3	B	108	111	anti-parallel
Strand 4	B	100	102	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	B	84	92	anti-parallel
Strand 3	B	120	128	anti-parallel
Strand 4	B	134	141	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	149	first strand
Strand 2	B	234	236	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	154	first strand
Strand 2	B	167	170	anti-parallel
Strand 3	B	204	209	anti-parallel
Strand 4	B	195	201	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	161	first strand
Strand 2	B	240	246	parallel
Strand 3	B	218	223	anti-parallel
Strand 4	B	185	190	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	274	first strand
Strand 2	B	260	265	anti-parallel
Strand 3	B	250	255	anti-parallel
Strand 4	B	371	375	parallel
Strand 5	B	287	290	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	294	300	first strand
Strand 2	B	317	324	anti-parallel
Strand 3	B	331	334	anti-parallel
Strand 4	B	352	354	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	61	first strand
Strand 2	A	77	81	anti-parallel
Strand 3	A	108	111	anti-parallel
Strand 4	A	100	102	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	92	first strand
Strand 2	A	120	127	anti-parallel
Strand 3	A	134	141	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	149	first strand
Strand 2	A	234	236	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	154	first strand
Strand 2	A	167	171	anti-parallel
Strand 3	A	204	208	anti-parallel
Strand 4	A	196	199	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	161	first strand
Strand 2	A	240	246	parallel
Strand 3	A	218	223	anti-parallel
Strand 4	A	185	190	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	271	274	first strand
Strand 2	A	260	265	anti-parallel
Strand 3	A	250	255	anti-parallel
Strand 4	A	371	375	parallel
Strand 5	A	287	290	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	294	300	first strand
Strand 2	A	317	324	anti-parallel
Strand 3	A	331	334	anti-parallel
Strand 4	A	352	354	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	61	first strand
Strand 2	D	77	81	anti-parallel
Strand 3	D	108	111	anti-parallel
Strand 4	D	100	102	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	97	98	first strand
Strand 2	D	84	92	anti-parallel
Strand 3	D	120	128	anti-parallel
Strand 4	D	133	141	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	147	149	first strand
Strand 2	D	234	236	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	154	first strand
Strand 2	D	167	171	anti-parallel
Strand 3	D	204	209	anti-parallel
Strand 4	D	195	199	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	160	161	first strand
Strand 2	D	240	246	parallel
Strand 3	D	218	223	anti-parallel
Strand 4	D	185	190	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	268	274	first strand
Strand 2	D	260	265	anti-parallel
Strand 3	D	250	255	anti-parallel
Strand 4	D	371	375	parallel
Strand 5	D	287	290	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	294	297	first strand
Strand 2	D	320	324	anti-parallel
Strand 3	D	331	334	anti-parallel
Strand 4	D	352	354	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	61	first strand
Strand 2	E	77	79	anti-parallel
Strand 3	E	108	111	anti-parallel
Strand 4	E	100	102	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	97	98	first strand
Strand 2	E	85	92	anti-parallel
Strand 3	E	120	127	anti-parallel
Strand 4	E	134	141	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	147	149	first strand
Strand 2	E	234	236	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	152	154	first strand
Strand 2	E	167	170	anti-parallel
Strand 3	E	204	209	anti-parallel
Strand 4	E	195	199	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	160	161	first strand
Strand 2	E	240	246	parallel
Strand 3	E	218	223	anti-parallel
Strand 4	E	185	190	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	251	255	first strand
Strand 2	E	371	375	parallel
Strand 3	E	287	290	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	294	300	first strand
Strand 2	E	317	324	anti-parallel
Strand 3	E	331	334	anti-parallel
Strand 4	E	352	354	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	78	first strand
Strand 2	C	109	111	anti-parallel
Strand 3	C	100	102	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	120	129	anti-parallel
Strand 3	C	89	92	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	120	129	anti-parallel
Strand 3	C	132	141	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	147	149	first strand
Strand 2	C	234	236	parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	154	first strand
Strand 2	C	167	171	anti-parallel
Strand 3	C	204	209	anti-parallel
Strand 4	C	195	199	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	161	first strand
Strand 2	C	240	246	parallel
Strand 3	C	218	223	anti-parallel
Strand 4	C	185	190	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	268	274	first strand
Strand 2	C	260	265	anti-parallel
Strand 3	C	251	255	anti-parallel
Strand 4	C	371	375	parallel
Strand 5	C	287	290	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	294	298	first strand
Strand 2	C	319	324	anti-parallel
Strand 3	C	331	334	anti-parallel
Strand 4	C	352	354	parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	61	first strand
Strand 2	F	77	81	anti-parallel
Strand 3	F	108	111	anti-parallel
Strand 4	F	100	102	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	67	70	first strand
Strand 2	F	135	142	parallel
Strand 3	F	120	128	anti-parallel
Strand 4	F	84	92	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	147	149	first strand
Strand 2	F	234	236	parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	151	154	first strand
Strand 2	F	167	171	anti-parallel
Strand 3	F	204	208	anti-parallel
Strand 4	F	196	199	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	160	161	first strand
Strand 2	F	240	246	parallel
Strand 3	F	218	223	anti-parallel
Strand 4	F	185	190	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	269	274	first strand
Strand 2	F	260	265	anti-parallel
Strand 3	F	250	255	anti-parallel
Strand 4	F	371	375	parallel
Strand 5	F	287	290	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	294	301	first strand
Strand 2	F	316	323	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	332	334	first strand
Strand 2	F	352	354	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5UWV

Analysis of interatomic Contacts of Structural Units in PDB entry:
5UWV