Analysis of interatomic Contacts of Structural Units in PDB entry:
5UWY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UWY entry

There is 1 chain in PDB entry 5UWY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -2PHE 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5UWY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
36 42Right-handed 310
Helix 3
AA3
A
55 69Right-handed alpha
Helix 4
AA4
A
130 135Right-handed alpha
Helix 5
AA5
A
136 138Right-handed 310
Helix 6
AA6
A
149 160Right-handed alpha
Helix 7
AA7
A
178 188Right-handed alpha
Helix 8
AA8
A
240 247Right-handed 310
Helix 9
AA9
A
272 275Right-handed 310
Helix 10
AB1
A
281 302Right-handed alpha
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There are 5 sheets in PDB entry 5UWY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 76first strand
Strand 2
A
27 31parallel
Strand 3
A
2 7parallel
Strand 4
A
97 105parallel
Strand 5
A
89 92anti-parallel
Strand 6
A
81 84anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 76first strand
Strand 2
A
27 31parallel
Strand 3
A
2 7parallel
Strand 4
A
97 105parallel
Strand 5
A
268 270parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 111first strand
Strand 2
A
236 238anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 128first strand
Strand 2
A
229 232parallel
Strand 3
A
142 146parallel
Strand 4
A
165 169parallel
Strand 5
A
191 194parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 204first strand
Strand 2
A
209 216anti-parallel
Strand 3
A
222 226anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il