Analysis of interatomic Contacts of Structural Units in PDB entry:
5UX5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5UX5 entry

There are 2 chains in PDB entry 5UX5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 7	ILE 1069
B	LEU 7	VAL 452

There are163 helices in PDB entry 5UX5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	30	Right-handed alpha
Helix 2	AA2	A	120	128	Right-handed alpha
Helix 3	AA3	A	133	146	Right-handed alpha
Helix 4	AA4	A	161	177	Right-handed alpha
Helix 5	AA5	A	188	192	Right-handed alpha
Helix 6	AA6	A	199	220	Right-handed alpha
Helix 7	AA7	A	233	235	Right-handed 310
Helix 8	AA8	A	236	250	Right-handed alpha
Helix 9	AA9	A	251	254	Right-handed 310
Helix 10	AB1	A	268	286	Right-handed alpha
Helix 11	AB2	A	300	312	Right-handed alpha
Helix 12	AB3	A	320	336	Right-handed alpha
Helix 13	AB4	A	337	341	Right-handed 310
Helix 14	AB5	A	351	366	Right-handed alpha
Helix 15	AB6	A	367	369	Right-handed 310
Helix 16	AB7	A	380	392	Right-handed alpha
Helix 17	AB8	A	405	420	Right-handed alpha
Helix 18	AB9	A	436	449	Right-handed alpha
Helix 19	AC1	A	456	460	Right-handed 310
Helix 20	AC2	A	474	483	Right-handed alpha
Helix 21	AC3	A	496	510	Right-handed alpha
Helix 22	AC4	A	514	532	Right-handed alpha
Helix 23	AC5	A	532	543	Right-handed alpha
Helix 24	AC6	A	547	573	Right-handed alpha
Helix 25	AC7	A	596	610	Right-handed alpha
Helix 26	AC8	A	618	620	Right-handed 310
Helix 27	AC9	A	621	635	Right-handed alpha
Helix 28	AD1	A	650	658	Right-handed alpha
Helix 29	AD2	A	670	681	Right-handed alpha
Helix 30	AD3	A	703	717	Right-handed alpha
Helix 31	AD4	A	718	721	Right-handed 310
Helix 32	AD5	A	737	749	Right-handed alpha
Helix 33	AD6	A	769	778	Right-handed alpha
Helix 34	AD7	A	830	840	Right-handed alpha
Helix 35	AD8	A	853	864	Right-handed alpha
Helix 36	AD9	A	904	907	Right-handed 310
Helix 37	AE1	A	924	931	Right-handed alpha
Helix 38	AE2	A	933	950	Right-handed alpha
Helix 39	AE3	A	981	996	Right-handed alpha
Helix 40	AE4	A	1023	1034	Right-handed alpha
Helix 41	AE5	A	1045	1050	Right-handed alpha
Helix 42	AE6	B	13	31	Right-handed alpha
Helix 43	AE7	B	120	128	Right-handed alpha
Helix 44	AE8	B	133	146	Right-handed alpha
Helix 45	AE9	B	161	177	Right-handed alpha
Helix 46	AF1	B	188	192	Right-handed alpha
Helix 47	AF2	B	199	220	Right-handed alpha
Helix 48	AF3	B	235	249	Right-handed alpha
Helix 49	AF4	B	250	254	Right-handed 310
Helix 50	AF5	B	268	286	Right-handed alpha
Helix 51	AF6	B	300	312	Right-handed alpha
Helix 52	AF7	B	320	336	Right-handed alpha
Helix 53	AF8	B	337	341	Right-handed 310
Helix 54	AF9	B	351	366	Right-handed alpha
Helix 55	AG1	B	367	369	Right-handed 310
Helix 56	AG2	B	380	392	Right-handed alpha
Helix 57	AG3	B	405	420	Right-handed alpha
Helix 58	AG4	B	436	448	Right-handed alpha
Helix 59	AG5	B	456	460	Right-handed 310
Helix 60	AG6	B	474	483	Right-handed alpha
Helix 61	AG7	B	496	510	Right-handed alpha
Helix 62	AG8	B	514	532	Right-handed alpha
Helix 63	AG9	B	532	543	Right-handed alpha
Helix 64	AH1	B	547	571	Right-handed alpha
Helix 65	AH2	B	572	574	Right-handed 310
Helix 66	AH3	B	596	610	Right-handed alpha
Helix 67	AH4	B	618	620	Right-handed 310
Helix 68	AH5	B	621	636	Right-handed alpha
Helix 69	AH6	B	650	658	Right-handed alpha
Helix 70	AH7	B	670	681	Right-handed alpha
Helix 71	AH8	B	703	717	Right-handed alpha
Helix 72	AH9	B	718	721	Right-handed 310
Helix 73	AI1	B	737	749	Right-handed alpha
Helix 74	AI2	B	769	778	Right-handed alpha
Helix 75	AI3	B	811	816	Right-handed alpha
Helix 76	AI4	B	830	840	Right-handed alpha
Helix 77	AI5	B	853	864	Right-handed alpha
Helix 78	AI6	B	904	907	Right-handed 310
Helix 79	AI7	B	924	931	Right-handed alpha
Helix 80	AI8	B	933	950	Right-handed alpha
Helix 81	AI9	B	981	996	Right-handed alpha
Helix 82	AJ1	B	1023	1034	Right-handed alpha
Helix 83	AJ2	B	1045	1050	Right-handed alpha
Helix 84	AJ3	C	13	30	Right-handed alpha
Helix 85	AJ4	C	120	126	Right-handed alpha
Helix 86	AJ5	C	133	146	Right-handed alpha
Helix 87	AJ6	C	161	178	Right-handed alpha
Helix 88	AJ7	C	188	192	Right-handed alpha
Helix 89	AJ8	C	199	220	Right-handed alpha
Helix 90	AJ9	C	235	250	Right-handed alpha
Helix 91	AK1	C	251	254	Right-handed 310
Helix 92	AK2	C	268	286	Right-handed alpha
Helix 93	AK3	C	300	312	Right-handed alpha
Helix 94	AK4	C	320	336	Right-handed alpha
Helix 95	AK5	C	337	341	Right-handed 310
Helix 96	AK6	C	351	366	Right-handed alpha
Helix 97	AK7	C	367	369	Right-handed 310
Helix 98	AK8	C	380	392	Right-handed alpha
Helix 99	AK9	C	405	419	Right-handed alpha
Helix 100	AL1	C	436	448	Right-handed alpha
Helix 101	AL2	C	456	460	Right-handed 310
Helix 102	AL3	C	474	483	Right-handed alpha
Helix 103	AL4	C	496	510	Right-handed alpha
Helix 104	AL5	C	514	532	Right-handed alpha
Helix 105	AL6	C	532	543	Right-handed alpha
Helix 106	AL7	C	547	572	Right-handed alpha
Helix 107	AL8	C	596	610	Right-handed alpha
Helix 108	AL9	C	618	620	Right-handed 310
Helix 109	AM1	C	621	635	Right-handed alpha
Helix 110	AM2	C	650	659	Right-handed alpha
Helix 111	AM3	C	670	680	Right-handed alpha
Helix 112	AM4	C	703	717	Right-handed alpha
Helix 113	AM5	C	718	721	Right-handed 310
Helix 114	AM6	C	737	749	Right-handed alpha
Helix 115	AM7	C	769	778	Right-handed alpha
Helix 116	AM8	C	811	816	Right-handed alpha
Helix 117	AM9	C	830	840	Right-handed alpha
Helix 118	AN1	C	853	864	Right-handed alpha
Helix 119	AN2	C	904	907	Right-handed 310
Helix 120	AN3	C	924	931	Right-handed alpha
Helix 121	AN4	C	933	950	Right-handed alpha
Helix 122	AN5	C	981	996	Right-handed alpha
Helix 123	AN6	C	1023	1034	Right-handed alpha
Helix 124	AN7	C	1045	1050	Right-handed alpha
Helix 125	AN8	D	13	31	Right-handed alpha
Helix 126	AN9	D	120	126	Right-handed alpha
Helix 127	AO1	D	133	147	Right-handed alpha
Helix 128	AO2	D	161	177	Right-handed alpha
Helix 129	AO3	D	188	192	Right-handed alpha
Helix 130	AO4	D	199	220	Right-handed alpha
Helix 131	AO5	D	235	250	Right-handed alpha
Helix 132	AO6	D	251	254	Right-handed 310
Helix 133	AO7	D	268	286	Right-handed alpha
Helix 134	AO8	D	300	312	Right-handed alpha
Helix 135	AO9	D	320	336	Right-handed alpha
Helix 136	AP1	D	351	366	Right-handed alpha
Helix 137	AP2	D	367	369	Right-handed 310
Helix 138	AP3	D	380	392	Right-handed alpha
Helix 139	AP4	D	402	404	Right-handed 310
Helix 140	AP5	D	405	420	Right-handed alpha
Helix 141	AP6	D	436	449	Right-handed alpha
Helix 142	AP7	D	456	460	Right-handed 310
Helix 143	AP8	D	474	483	Right-handed alpha
Helix 144	AP9	D	496	510	Right-handed alpha
Helix 145	AQ1	D	514	532	Right-handed alpha
Helix 146	AQ2	D	532	543	Right-handed alpha
Helix 147	AQ3	D	547	573	Right-handed alpha
Helix 148	AQ4	D	596	610	Right-handed alpha
Helix 149	AQ5	D	621	635	Right-handed alpha
Helix 150	AQ6	D	650	658	Right-handed alpha
Helix 151	AQ7	D	670	680	Right-handed alpha
Helix 152	AQ8	D	703	717	Right-handed alpha
Helix 153	AQ9	D	718	721	Right-handed 310
Helix 154	AR1	D	737	749	Right-handed alpha
Helix 155	AR2	D	769	778	Right-handed alpha
Helix 156	AR3	D	830	839	Right-handed alpha
Helix 157	AR4	D	853	864	Right-handed alpha
Helix 158	AR5	D	904	907	Right-handed 310
Helix 159	AR6	D	924	931	Right-handed alpha
Helix 160	AR7	D	933	950	Right-handed alpha
Helix 161	AR8	D	981	996	Right-handed alpha
Helix 162	AR9	D	1023	1034	Right-handed alpha
Helix 163	AS1	D	1045	1050	Right-handed alpha

There are 26 sheets in PDB entry 5UX5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	130	first strand
Strand 2	A	394	401	parallel
Strand 3	A	371	376	parallel
Strand 4	A	343	348	parallel
Strand 5	A	291	296	parallel
Strand 6	A	258	263	parallel
Strand 7	A	226	230	parallel
Strand 8	A	183	187	parallel
Strand 9	A	149	155	parallel
Strand 10	A	394	401	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	578	582	first strand
Strand 2	A	909	913	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	642	644	first strand
Strand 2	A	612	616	parallel
Strand 3	A	585	589	parallel
Strand 4	A	664	668	parallel
Strand 5	A	685	689	parallel
Strand 6	A	892	893	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	784	787	first strand
Strand 2	A	802	805	anti-parallel
Strand 3	A	822	828	parallel
Strand 4	A	726	732	parallel
Strand 5	A	694	698	parallel
Strand 6	A	846	850	parallel
Strand 7	A	868	871	parallel
Strand 8	A	1054	1062	parallel
Strand 9	A	963	971	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	843	844	first strand
Strand 2	A	888	889	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	998	1001	first strand
Strand 2	A	974	978	parallel
Strand 3	A	1013	1016	parallel
Strand 4	A	1036	1038	parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	130	first strand
Strand 2	B	394	401	parallel
Strand 3	B	371	376	parallel
Strand 4	B	343	348	parallel
Strand 5	B	291	296	parallel
Strand 6	B	258	263	parallel
Strand 7	B	226	230	parallel
Strand 8	B	183	187	parallel
Strand 9	B	149	155	parallel
Strand 10	B	394	401	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	493	494	first strand
Strand 2	B	646	647	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	578	582	first strand
Strand 2	B	909	913	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	642	644	first strand
Strand 2	B	612	616	parallel
Strand 3	B	585	589	parallel
Strand 4	B	664	668	parallel
Strand 5	B	686	689	parallel
Strand 6	B	892	893	anti-parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	784	787	first strand
Strand 2	B	802	805	anti-parallel
Strand 3	B	822	828	parallel
Strand 4	B	726	732	parallel
Strand 5	B	694	698	parallel
Strand 6	B	846	850	parallel
Strand 7	B	868	871	parallel
Strand 8	B	1054	1062	parallel
Strand 9	B	963	971	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	843	844	first strand
Strand 2	B	888	889	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	998	1001	first strand
Strand 2	B	974	978	parallel
Strand 3	B	1013	1016	parallel
Strand 4	B	1036	1038	parallel

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There are 10 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	130	first strand
Strand 2	C	394	401	parallel
Strand 3	C	371	376	parallel
Strand 4	C	343	348	parallel
Strand 5	C	291	296	parallel
Strand 6	C	258	263	parallel
Strand 7	C	226	230	parallel
Strand 8	C	183	187	parallel
Strand 9	C	148	155	parallel
Strand 10	C	394	401	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	578	582	first strand
Strand 2	C	909	913	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	642	644	first strand
Strand 2	C	612	616	parallel
Strand 3	C	585	589	parallel
Strand 4	C	664	668	parallel
Strand 5	C	686	689	parallel
Strand 6	C	892	893	anti-parallel

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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	784	787	first strand
Strand 2	C	802	805	anti-parallel
Strand 3	C	822	828	parallel
Strand 4	C	726	732	parallel
Strand 5	C	694	698	parallel
Strand 6	C	846	850	parallel
Strand 7	C	868	871	parallel
Strand 8	C	1054	1062	parallel
Strand 9	C	963	971	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	843	844	first strand
Strand 2	C	888	889	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	998	1001	first strand
Strand 2	C	974	978	parallel
Strand 3	C	1013	1016	parallel
Strand 4	C	1036	1038	parallel

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There are 10 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	129	130	first strand
Strand 2	D	394	401	parallel
Strand 3	D	371	376	parallel
Strand 4	D	343	348	parallel
Strand 5	D	291	296	parallel
Strand 6	D	258	263	parallel
Strand 7	D	226	230	parallel
Strand 8	D	183	187	parallel
Strand 9	D	148	154	parallel
Strand 10	D	394	401	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	493	494	first strand
Strand 2	D	646	647	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	578	582	first strand
Strand 2	D	909	913	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	642	644	first strand
Strand 2	D	612	617	parallel
Strand 3	D	585	590	parallel
Strand 4	D	664	668	parallel
Strand 5	D	686	689	parallel
Strand 6	D	892	893	anti-parallel

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There are 9 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	784	787	first strand
Strand 2	D	802	805	anti-parallel
Strand 3	D	822	828	parallel
Strand 4	D	726	732	parallel
Strand 5	D	694	698	parallel
Strand 6	D	846	850	parallel
Strand 7	D	868	871	parallel
Strand 8	D	1054	1062	parallel
Strand 9	D	963	971	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	843	844	first strand
Strand 2	D	888	889	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	998	1001	first strand
Strand 2	D	974	978	parallel
Strand 3	D	1013	1016	parallel
Strand 4	D	1036	1038	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5UX5

Analysis of interatomic Contacts of Structural Units in PDB entry:
5UX5