Analysis of interatomic Contacts of Structural Units in PDB entry:
5UXH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UXH entry

There are 2 chains in PDB entry 5UXH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 28LEU 384
B
 SER 28LEU 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 5UXH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 61Right-handed alpha
Helix 2
AA2
A
86 90Right-handed alpha
Helix 3
AA3
A
93 98Right-handed alpha
Helix 4
AA4
A
105 112Right-handed alpha
Helix 5
AA5
A
112 117Right-handed alpha
Helix 6
AA6
A
118 121Right-handed 310
Helix 7
AA7
A
128 132Right-handed alpha
Helix 8
AA8
A
147 154Right-handed alpha
Helix 9
AA9
A
171 173Right-handed 310
Helix 10
AB1
A
174 182Right-handed alpha
Helix 11
AB2
A
202 212Right-handed 310
Helix 12
AB3
A
215 230Right-handed alpha
Helix 13
AB4
A
242 254Right-handed alpha
Helix 14
AB5
A
264 269Right-handed alpha
Helix 15
AB6
A
279 284Right-handed alpha
Helix 16
AB7
A
286 302Right-handed alpha
Helix 17
AB8
A
315 323Right-handed alpha
Helix 18
AB9
A
337 346Right-handed alpha
Helix 19
AC1
A
356 370Right-handed alpha
Helix 20
AC2
B
43 61Right-handed alpha
Helix 21
AC3
B
86 91Right-handed alpha
Helix 22
AC4
B
93 98Right-handed alpha
Helix 23
AC5
B
105 112Right-handed alpha
Helix 24
AC6
B
112 117Right-handed alpha
Helix 25
AC7
B
118 121Right-handed 310
Helix 26
AC8
B
128 133Right-handed alpha
Helix 27
AC9
B
147 154Right-handed alpha
Helix 28
AD1
B
171 173Right-handed 310
Helix 29
AD2
B
174 182Right-handed alpha
Helix 30
AD3
B
202 212Right-handed 310
Helix 31
AD4
B
215 230Right-handed alpha
Helix 32
AD5
B
242 249Right-handed alpha
Helix 33
AD6
B
264 269Right-handed alpha
Helix 34
AD7
B
279 284Right-handed alpha
Helix 35
AD8
B
286 302Right-handed alpha
Helix 36
AD9
B
315 323Right-handed alpha
Helix 37
AE1
B
336 346Right-handed alpha
Helix 38
AE2
B
356 370Right-handed alpha
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There are 9 sheets in PDB entry 5UXH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 104first strand
Strand 2
A
64 67parallel
Strand 3
A
34 36parallel
Strand 4
A
189 191parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
82 85anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
213 214anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 127first strand
Strand 2
A
161 165parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 330first strand
Strand 2
A
305 310parallel
Strand 3
A
234 239parallel
Strand 4
A
349 352parallel
Strand 5
A
373 375parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 104first strand
Strand 2
B
64 67parallel
Strand 3
B
34 36parallel
Strand 4
B
189 191parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 72first strand
Strand 2
B
83 85anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 127first strand
Strand 2
B
161 165parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
328 330first strand
Strand 2
B
305 310parallel
Strand 3
B
234 239parallel
Strand 4
B
349 352parallel
Strand 5
B
373 375parallel
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