Analysis of interatomic Contacts of Structural Units in PDB entry:
5UXM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UXM entry

There is 1 chain in PDB entry 5UXM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4ARG 448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5UXM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 13Right-handed 310
Helix 2
AA2
A
23 36Right-handed alpha
Helix 3
AA3
A
42 58Right-handed alpha
Helix 4
AA4
A
77 100Right-handed alpha
Helix 5
AA5
A
143 148Right-handed alpha
Helix 6
AA6
A
151 174Right-handed alpha
Helix 7
AA7
A
178 186Right-handed 310
Helix 8
AA8
A
193 216Right-handed alpha
Helix 9
AA9
A
221 225Right-handed 310
Helix 10
AB1
A
237 244Right-handed alpha
Helix 11
AB2
A
273 281Right-handed alpha
Helix 12
AB3
A
295 307Right-handed alpha
Helix 13
AB4
A
325 340Right-handed alpha
Helix 14
AB5
A
366 385Right-handed alpha
Helix 15
AB6
A
413 421Right-handed 310
Helix 16
AB7
A
428 447Right-handed alpha
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There are 4 sheets in PDB entry 5UXM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 67first strand
Strand 2
A
103 108parallel
Strand 3
A
230 234parallel
Strand 4
A
261 264parallel
Strand 5
A
286 290parallel
Strand 6
A
315 319parallel
Strand 7
A
345 348parallel
Strand 8
A
390 394parallel
Strand 9
A
62 67parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 124first strand
Strand 2
A
127 130anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 247first strand
Strand 2
A
254 256anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 357first strand
Strand 2
A
363 365anti-parallel
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