Analysis of interatomic Contacts of Structural Units in PDB entry:
5UXV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UXV entry

There are 2 chains in PDB entry 5UXV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0LYS 262
B
 SER 2ALA 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5UXV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 8Right-handed alpha
Helix 2
AA2
A
10 23Right-handed alpha
Helix 3
AA3
A
24 42Right-handed alpha
Helix 4
AA4
A
43 46Right-handed 310
Helix 5
AA5
A
51 65Right-handed alpha
Helix 6
AA6
A
87 92Right-handed alpha
Helix 7
AA7
A
93 104Right-handed alpha
Helix 8
AA8
A
108 117Right-handed alpha
Helix 9
AA9
A
119 136Right-handed alpha
Helix 10
AB1
A
148 162Right-handed alpha
Helix 11
AB2
A
172 184Right-handed alpha
Helix 12
AB3
A
199 209Right-handed alpha
Helix 13
AB4
A
221 226Right-handed 310
Helix 14
AB5
A
242 262Right-handed alpha
Helix 15
AB6
B
3 8Right-handed alpha
Helix 16
AB7
B
10 23Right-handed alpha
Helix 17
AB8
B
24 42Right-handed alpha
Helix 18
AB9
B
43 46Right-handed 310
Helix 19
AC1
B
51 65Right-handed alpha
Helix 20
AC2
B
87 92Right-handed alpha
Helix 21
AC3
B
93 104Right-handed alpha
Helix 22
AC4
B
108 116Right-handed alpha
Helix 23
AC5
B
119 135Right-handed alpha
Helix 24
AC6
B
148 162Right-handed alpha
Helix 25
AC7
B
172 184Right-handed alpha
Helix 26
AC8
B
194 198Right-handed 310
Helix 27
AC9
B
199 209Right-handed alpha
Helix 28
AD1
B
221 226Right-handed 310
Helix 29
AD2
B
242 260Right-handed alpha
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There are 2 sheets in PDB entry 5UXV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 170first strand
Strand 2
A
141 145parallel
Strand 3
A
187 191parallel
Strand 4
A
215 219parallel
Strand 5
A
235 238parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 170first strand
Strand 2
B
141 145parallel
Strand 3
B
187 191parallel
Strand 4
B
215 219parallel
Strand 5
B
235 238parallel
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