Analysis of interatomic Contacts of Structural Units in PDB entry:
5UZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UZ8 entry

There is 1 chain in PDB entry 5UZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2265VAL 2581
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 5UZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2302 2307Right-handed 310
Helix 2
AA2
A
2408 2412Right-handed 310
Helix 3
AA3
A
2461 2465Right-handed 310
Helix 4
AA4
A
2515 2520Right-handed 310
Helix 5
AA5
A
2529 2531Right-handed 310
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There are 8 sheets in PDB entry 5UZ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2269 2270first strand
Strand 2
A
2297 2298anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2278 2283first strand
Strand 2
A
2360 2370parallel
Strand 3
A
2344 2352anti-parallel
Strand 4
A
2309 2316anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2291 2295first strand
Strand 2
A
2329 2333anti-parallel
Strand 3
A
2321 2323anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2378 2379first strand
Strand 2
A
2403 2404anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2384 2389first strand
Strand 2
A
2467 2477parallel
Strand 3
A
2447 2456anti-parallel
Strand 4
A
2414 2418anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2397 2400first strand
Strand 2
A
2433 2436anti-parallel
Strand 3
A
2425 2427anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2490 2496first strand
Strand 2
A
2569 2579parallel
Strand 3
A
2553 2561anti-parallel
Strand 4
A
2522 2526anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2504 2507first strand
Strand 2
A
2541 2544anti-parallel
Strand 3
A
2533 2535anti-parallel
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