Analysis of interatomic Contacts of Structural Units in PDB entry:
5UZQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UZQ entry

There are 3 chains in PDB entry 5UZQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 30PRO 210
A
 VAL 212THR 358
A
 GLN 360SER 463
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 5UZQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 56Right-handed alpha
Helix 2
AA2
A
64 70Right-handed alpha
Helix 3
AA3
A
98 105Right-handed alpha
Helix 4
AA4
A
115 126Right-handed alpha
Helix 5
AA5
A
130 145Right-handed alpha
Helix 6
AA6
A
148 158Right-handed alpha
Helix 7
AA7
A
163 175Right-handed alpha
Helix 8
AA8
A
176 178Right-handed 310
Helix 9
AA9
A
179 188Right-handed alpha
Helix 10
AB1
A
190 192Right-handed 310
Helix 11
AB2
A
193 222Right-handed alpha
Helix 12
AB3
A
235 245Right-handed alpha
Helix 13
AB4
A
248 262Right-handed alpha
Helix 14
AB5
A
269 280Right-handed alpha
Helix 15
AB6
A
284 297Right-handed alpha
Helix 16
AB7
A
298 303Right-handed alpha
Helix 17
AB8
A
303 320Right-handed alpha
Helix 18
AB9
A
324 338Right-handed alpha
Helix 19
AC1
A
354 368Right-handed alpha
Helix 20
AC2
A
371 392Right-handed alpha
Helix 21
AC3
A
401 403Right-handed 310
Helix 22
AC4
A
404 412Right-handed alpha
Helix 23
AC5
A
416 418Right-handed 310
Helix 24
AC6
A
419 442Right-handed alpha
Helix 25
AC7
A
453 463Right-handed alpha
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There are 2 sheets in PDB entry 5UZQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
90 93anti-parallel
Strand 3
A
96 97anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 347first strand
Strand 2
A
396 399anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il