Analysis of interatomic Contacts of Structural Units in PDB entry:
5V0Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5V0Z entry

There are 3 chains in PDB entry 5V0Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 189
B
 MET 1PRO 189
C
 MET 1PRO 189
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5V0Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 9Right-handed alpha
Helix 2
AA2
A
18 37Right-handed alpha
Helix 3
AA3
A
42 55Right-handed alpha
Helix 4
AA4
A
117 122Right-handed alpha
Helix 5
AA5
B
2 9Right-handed alpha
Helix 6
AA6
B
18 37Right-handed alpha
Helix 7
AA7
B
42 55Right-handed alpha
Helix 8
AA8
B
117 123Right-handed alpha
Helix 9
AA9
C
2 9Right-handed alpha
Helix 10
AB1
C
18 37Right-handed alpha
Helix 11
AB2
C
42 55Right-handed alpha
Helix 12
AB3
C
117 123Right-handed alpha
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There are 12 sheets in PDB entry 5V0Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
81 83parallel
Strand 3
A
101 103parallel
Strand 4
A
137 139parallel
Strand 5
A
156 157parallel
Strand 6
A
171 174parallel
Strand 7
A
179 183anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 69first strand
Strand 2
A
87 90parallel
Strand 3
A
108 110parallel
Strand 4
A
144 145parallel
Strand 5
A
162 163parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 77first strand
Strand 2
A
95 97parallel
Strand 3
A
131 133parallel
Strand 4
A
150 151parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 113first strand
Strand 2
A
127 128anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 14first strand
Strand 2
B
125 128anti-parallel
Strand 3
B
112 113anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
81 83parallel
Strand 3
B
101 103parallel
Strand 4
B
137 139parallel
Strand 5
B
156 157parallel
Strand 6
B
171 174parallel
Strand 7
B
179 183anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 69first strand
Strand 2
B
87 90parallel
Strand 3
B
108 110parallel
Strand 4
B
144 145parallel
Strand 5
B
162 163parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 77first strand
Strand 2
B
95 97parallel
Strand 3
B
131 133parallel
Strand 4
B
150 151parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 14first strand
Strand 2
C
125 128anti-parallel
Strand 3
C
112 113anti-parallel
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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 63first strand
Strand 2
C
81 83parallel
Strand 3
C
101 103parallel
Strand 4
C
137 139parallel
Strand 5
C
156 157parallel
Strand 6
C
171 174parallel
Strand 7
C
179 183anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
67 69first strand
Strand 2
C
87 90parallel
Strand 3
C
108 110parallel
Strand 4
C
144 145parallel
Strand 5
C
162 163parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
75 77first strand
Strand 2
C
95 97parallel
Strand 3
C
131 133parallel
Strand 4
C
150 151parallel
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