Analysis of interatomic Contacts of Structural Units in PDB entry:
5V5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5V5T entry

There are 4 chains in PDB entry 5V5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3GLY 308
B
 LYS 4GLY 308
C
 GLU 8ASN 307
D
 MSE 7LYS 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 5V5T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 23Right-handed alpha
Helix 2
AA2
A
26 33Right-handed alpha
Helix 3
AA3
A
36 45Right-handed alpha
Helix 4
AA4
A
51 63Right-handed alpha
Helix 5
AA5
A
65 73Right-handed 310
Helix 6
AA6
A
77 92Right-handed alpha
Helix 7
AA7
A
94 112Right-handed alpha
Helix 8
AA8
A
115 133Right-handed alpha
Helix 9
AA9
A
139 157Right-handed alpha
Helix 10
AB1
A
161 175Right-handed alpha
Helix 11
AB2
A
180 194Right-handed alpha
Helix 12
AB3
A
198 220Right-handed alpha
Helix 13
AB4
A
221 235Right-handed alpha
Helix 14
AB5
A
241 259Right-handed alpha
Helix 15
AB6
A
263 278Right-handed alpha
Helix 16
AB7
A
283 308Right-handed alpha
Helix 17
AB8
B
9 23Right-handed alpha
Helix 18
AB9
B
26 33Right-handed alpha
Helix 19
AC1
B
36 45Right-handed alpha
Helix 20
AC2
B
51 63Right-handed alpha
Helix 21
AC3
B
65 73Right-handed 310
Helix 22
AC4
B
77 93Right-handed alpha
Helix 23
AC5
B
94 112Right-handed alpha
Helix 24
AC6
B
115 133Right-handed alpha
Helix 25
AC7
B
139 157Right-handed alpha
Helix 26
AC8
B
161 175Right-handed alpha
Helix 27
AC9
B
180 194Right-handed alpha
Helix 28
AD1
B
198 220Right-handed alpha
Helix 29
AD2
B
221 235Right-handed alpha
Helix 30
AD3
B
241 259Right-handed alpha
Helix 31
AD4
B
263 278Right-handed alpha
Helix 32
AD5
B
283 307Right-handed alpha
Helix 33
AD6
C
9 23Right-handed alpha
Helix 34
AD7
C
26 33Right-handed alpha
Helix 35
AD8
C
36 45Right-handed alpha
Helix 36
AD9
C
51 63Right-handed alpha
Helix 37
AE1
C
65 73Right-handed 310
Helix 38
AE2
C
77 92Right-handed alpha
Helix 39
AE3
C
94 112Right-handed alpha
Helix 40
AE4
C
115 133Right-handed alpha
Helix 41
AE5
C
139 157Right-handed alpha
Helix 42
AE6
C
161 175Right-handed alpha
Helix 43
AE7
C
180 192Right-handed alpha
Helix 44
AE8
C
198 220Right-handed alpha
Helix 45
AE9
C
221 235Right-handed alpha
Helix 46
AF1
C
241 259Right-handed alpha
Helix 47
AF2
C
263 278Right-handed alpha
Helix 48
AF3
C
283 306Right-handed alpha
Helix 49
AF4
D
9 23Right-handed alpha
Helix 50
AF5
D
27 33Right-handed alpha
Helix 51
AF6
D
36 45Right-handed alpha
Helix 52
AF7
D
51 62Right-handed alpha
Helix 53
AF8
D
65 69Right-handed 310
Helix 54
AF9
D
77 92Right-handed alpha
Helix 55
AG1
D
94 112Right-handed alpha
Helix 56
AG2
D
115 133Right-handed alpha
Helix 57
AG3
D
139 157Right-handed alpha
Helix 58
AG4
D
161 175Right-handed alpha
Helix 59
AG5
D
180 192Right-handed alpha
Helix 60
AG6
D
198 220Right-handed alpha
Helix 61
AG7
D
221 235Right-handed alpha
Helix 62
AG8
D
241 259Right-handed alpha
Helix 63
AG9
D
263 278Right-handed alpha
Helix 64
AH1
D
283 308Right-handed alpha
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There are no sheets in PDB entry 5V5T
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