Analysis of interatomic Contacts of Structural Units in PDB entry:
5V5U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5V5U entry

There are 2 chains in PDB entry 5V5U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ARG 10GLU 306
A
 LYS 4GLU 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 5V5U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
11 23Right-handed alpha
Helix 2
AA2
B
27 33Right-handed alpha
Helix 3
AA3
B
36 46Right-handed alpha
Helix 4
AA4
B
51 62Right-handed alpha
Helix 5
AA5
B
65 73Right-handed alpha
Helix 6
AA6
B
77 92Right-handed alpha
Helix 7
AA7
B
94 112Right-handed alpha
Helix 8
AA8
B
115 133Right-handed alpha
Helix 9
AA9
B
139 157Right-handed alpha
Helix 10
AB1
B
161 175Right-handed alpha
Helix 11
AB2
B
180 193Right-handed alpha
Helix 12
AB3
B
198 220Right-handed alpha
Helix 13
AB4
B
221 235Right-handed alpha
Helix 14
AB5
B
241 259Right-handed alpha
Helix 15
AB6
B
263 278Right-handed alpha
Helix 16
AB7
B
283 305Right-handed alpha
Helix 17
AB8
A
9 23Right-handed alpha
Helix 18
AB9
A
27 33Right-handed alpha
Helix 19
AC1
A
36 46Right-handed alpha
Helix 20
AC2
A
51 63Right-handed alpha
Helix 21
AC3
A
65 68Right-handed 310
Helix 22
AC4
A
69 74Right-handed alpha
Helix 23
AC5
A
77 92Right-handed alpha
Helix 24
AC6
A
94 112Right-handed alpha
Helix 25
AC7
A
115 133Right-handed alpha
Helix 26
AC8
A
139 157Right-handed alpha
Helix 27
AC9
A
161 175Right-handed alpha
Helix 28
AD1
A
180 192Right-handed alpha
Helix 29
AD2
A
198 220Right-handed alpha
Helix 30
AD3
A
221 235Right-handed alpha
Helix 31
AD4
A
241 259Right-handed alpha
Helix 32
AD5
A
263 278Right-handed alpha
Helix 33
AD6
A
279 281Right-handed 310
Helix 34
AD7
A
283 305Right-handed alpha
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There are no sheets in PDB entry 5V5U
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