Analysis of interatomic Contacts of Structural Units in PDB entry:
5V6E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5V6E entry

There are 10 chains in PDB entry 5V6E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 260TYR 333
B
 GLY 1050ASN 1096
C
 PHE 260TYR 333
D
 HIS 1052ASN 1096
E
 PHE 260TYR 333
F
 ASP 1053ASN 1096
G
 PHE 260TYR 333
H
 HIS 1052ASN 1096
I
 PHE 260TYR 333
J
 HIS 1052ASN 1096
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 5V6E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
260 277Right-handed alpha
Helix 2
AA2
A
280 292Right-handed alpha
Helix 3
AA3
A
296 308Right-handed alpha
Helix 4
AA4
A
309 312Right-handed 310
Helix 5
AA5
A
314 331Right-handed alpha
Helix 6
AA6
B
1058 1067Right-handed alpha
Helix 7
AA7
B
1071 1094Right-handed alpha
Helix 8
AA8
C
261 276Right-handed alpha
Helix 9
AA9
C
280 292Right-handed alpha
Helix 10
AB1
C
296 308Right-handed alpha
Helix 11
AB2
C
309 312Right-handed 310
Helix 12
AB3
C
314 330Right-handed alpha
Helix 13
AB4
D
1058 1067Right-handed alpha
Helix 14
AB5
D
1071 1096Right-handed alpha
Helix 15
AB6
E
261 277Right-handed alpha
Helix 16
AB7
E
280 292Right-handed alpha
Helix 17
AB8
E
296 308Right-handed alpha
Helix 18
AB9
E
309 312Right-handed 310
Helix 19
AC1
E
314 331Right-handed alpha
Helix 20
AC2
F
1053 1057Right-handed 310
Helix 21
AC3
F
1058 1067Right-handed alpha
Helix 22
AC4
F
1071 1096Right-handed alpha
Helix 23
AC5
G
261 273Right-handed alpha
Helix 24
AC6
G
280 289Right-handed alpha
Helix 25
AC7
G
296 309Right-handed alpha
Helix 26
AC8
G
314 331Right-handed alpha
Helix 27
AC9
H
1053 1057Right-handed 310
Helix 28
AD1
H
1058 1067Right-handed alpha
Helix 29
AD2
H
1071 1094Right-handed alpha
Helix 30
AD3
I
261 273Right-handed alpha
Helix 31
AD4
I
280 289Right-handed alpha
Helix 32
AD5
I
296 303Right-handed alpha
Helix 33
AD6
I
303 308Right-handed alpha
Helix 34
AD7
I
309 312Right-handed 310
Helix 35
AD8
I
314 331Right-handed alpha
Helix 36
AD9
J
1058 1067Right-handed alpha
Helix 37
AE1
J
1071 1094Right-handed alpha
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There are no sheets in PDB entry 5V6E
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