Analysis of interatomic Contacts of Structural Units in PDB entry:
5V6F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5V6F entry

There is 1 chain in PDB entry 5V6F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 821TYR 957
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 5V6F

There are 4 sheets in PDB entry 5V6F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
826 827first strand
Strand 2
A
950 956anti-parallel
Strand 3
A
940 945anti-parallel
Strand 4
A
832 837anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
863 864first strand
Strand 2
A
852 856anti-parallel
Strand 3
A
843 848anti-parallel
Strand 4
A
874 875anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
863 864first strand
Strand 2
A
852 856anti-parallel
Strand 3
A
843 848anti-parallel
Strand 4
A
879 880anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
913 917first strand
Strand 2
A
899 908anti-parallel
Strand 3
A
884 894anti-parallel
Strand 4
A
922 931anti-parallel
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