Analysis of interatomic Contacts of Structural Units in PDB entry:
5V6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5V6H entry

There are 10 chains in PDB entry 5V6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 238GLN 312
B
 ASP 1053ASN 1096
C
 SER 240GLN 312
D
 ASP 1053ASN 1096
E
 PRO 237GLN 312
F
 ASP 1053ASN 1096
G
 SER 240GLN 312
H
 HIS 1052ASN 1096
I
 SER 240GLN 312
J
 ASP 1053ASN 1096
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 5V6H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
240 258Right-handed alpha
Helix 2
AA2
A
262 271Right-handed alpha
Helix 3
AA3
A
278 291Right-handed alpha
Helix 4
AA4
A
292 294Right-handed 310
Helix 5
AA5
A
296 308Right-handed alpha
Helix 6
AA6
A
309 312Right-handed 310
Helix 7
AA7
B
1058 1067Right-handed alpha
Helix 8
AA8
B
1071 1096Right-handed alpha
Helix 9
AA9
C
241 249Right-handed alpha
Helix 10
AB1
C
250 255Right-handed alpha
Helix 11
AB2
C
262 272Right-handed alpha
Helix 12
AB3
C
278 291Right-handed alpha
Helix 13
AB4
C
296 312Right-handed alpha
Helix 14
AB5
D
1058 1063Right-handed alpha
Helix 15
AB6
D
1064 1069Right-handed alpha
Helix 16
AB7
D
1071 1096Right-handed alpha
Helix 17
AB8
E
240 258Right-handed alpha
Helix 18
AB9
E
262 271Right-handed alpha
Helix 19
AC1
E
278 291Right-handed alpha
Helix 20
AC2
E
296 308Right-handed alpha
Helix 21
AC3
F
1058 1069Right-handed alpha
Helix 22
AC4
F
1071 1094Right-handed alpha
Helix 23
AC5
G
241 258Right-handed alpha
Helix 24
AC6
G
262 272Right-handed alpha
Helix 25
AC7
G
280 291Right-handed alpha
Helix 26
AC8
G
296 309Right-handed alpha
Helix 27
AC9
H
1053 1057Right-handed 310
Helix 28
AD1
H
1058 1069Right-handed alpha
Helix 29
AD2
H
1071 1095Right-handed alpha
Helix 30
AD3
I
241 256Right-handed alpha
Helix 31
AD4
I
262 271Right-handed alpha
Helix 32
AD5
I
278 290Right-handed alpha
Helix 33
AD6
I
296 309Right-handed alpha
Helix 34
AD7
J
1058 1069Right-handed alpha
Helix 35
AD8
J
1071 1096Right-handed alpha
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There are no sheets in PDB entry 5V6H
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