Analysis of interatomic Contacts of Structural Units in PDB entry:
5V7O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5V7O entry

There is 1 chain in PDB entry 5V7O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 28ASP 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5V7O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 46Right-handed alpha
Helix 2
AA2
A
46 54Right-handed alpha
Helix 3
AA3
A
77 94Right-handed alpha
Helix 4
AA4
A
102 116Right-handed alpha
Helix 5
AA5
A
133 143Right-handed alpha
Helix 6
AA6
A
146 151Right-handed alpha
Helix 7
AA7
A
151 163Right-handed alpha
Helix 8
AA8
A
165 180Right-handed alpha
Helix 9
AA9
A
188 194Right-handed alpha
Helix 10
AB1
A
207 217Right-handed alpha
Helix 11
AB2
A
218 221Right-handed 310
Helix 12
AB3
A
235 240Right-handed alpha
Helix 13
AB4
A
240 256Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5V7O.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
31 35parallel
Strand 3
A
96 101parallel
Strand 4
A
120 126parallel
Strand 5
A
199 204parallel
Strand 6
A
225 229parallel
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