Analysis of interatomic Contacts of Structural Units in PDB entry:
5VB2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5VB2 entry

There are 3 chains in PDB entry 5VB2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 1000LEU 1265
B
 MET 2001LEU 2260
C
 TYR 1002PHE 1141
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 5VB2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1000 1010Right-handed alpha
Helix 2
AA2
A
1011 1032Right-handed alpha
Helix 3
AA3
A
1034 1068Right-handed alpha
Helix 4
AA4
A
1068 1073Right-handed alpha
Helix 5
AA5
A
1074 1089Right-handed alpha
Helix 6
AA6
A
1097 1102Right-handed alpha
Helix 7
AA7
A
1103 1106Right-handed 310
Helix 8
AA8
A
1107 1112Right-handed alpha
Helix 9
AA9
A
1113 1125Right-handed alpha
Helix 10
AB1
A
1126 1153Right-handed alpha
Helix 11
AB2
A
1156 1161Right-handed alpha
Helix 12
AB3
A
1162 1175Right-handed alpha
Helix 13
AB4
A
1183 1191Right-handed alpha
Helix 14
AB5
A
1194 1265Right-handed alpha
Helix 15
AB6
B
2002 2010Right-handed alpha
Helix 16
AB7
B
2011 2032Right-handed alpha
Helix 17
AB8
B
2034 2068Right-handed alpha
Helix 18
AB9
B
2069 2072Right-handed 310
Helix 19
AC1
B
2074 2089Right-handed alpha
Helix 20
AC2
B
2096 2102Right-handed alpha
Helix 21
AC3
B
2103 2106Right-handed 310
Helix 22
AC4
B
2107 2113Right-handed alpha
Helix 23
AC5
B
2113 2125Right-handed alpha
Helix 24
AC6
B
2126 2153Right-handed alpha
Helix 25
AC7
B
2156 2161Right-handed alpha
Helix 26
AC8
B
2162 2176Right-handed alpha
Helix 27
AC9
B
2183 2191Right-handed alpha
Helix 28
AD1
B
2194 2260Right-handed alpha
Helix 29
AD2
C
1003 1011Right-handed alpha
Helix 30
AD3
C
1011 1032Right-handed alpha
Helix 31
AD4
C
1034 1068Right-handed alpha
Helix 32
AD5
C
1068 1073Right-handed alpha
Helix 33
AD6
C
1074 1089Right-handed alpha
Helix 34
AD7
C
1096 1102Right-handed alpha
Helix 35
AD8
C
1103 1106Right-handed 310
Helix 36
AD9
C
1107 1113Right-handed alpha
Helix 37
AE1
C
1113 1125Right-handed alpha
Helix 38
AE2
C
1126 1153Right-handed alpha
Helix 39
AE3
C
1156 1161Right-handed alpha
Helix 40
AE4
C
1162 1175Right-handed alpha
Helix 41
AE5
C
1183 1191Right-handed alpha
Helix 42
AE6
C
1194 1264Right-handed alpha
Helix 43
AE7
D
1999 2010Right-handed alpha
Helix 44
AE8
D
2011 2032Right-handed alpha
Helix 45
AE9
D
2034 2068Right-handed alpha
Helix 46
AF1
D
2068 2073Right-handed alpha
Helix 47
AF2
D
2074 2089Right-handed alpha
Helix 48
AF3
D
2097 2102Right-handed alpha
Helix 49
AF4
D
2103 2106Right-handed 310
Helix 50
AF5
D
2107 2112Right-handed alpha
Helix 51
AF6
D
2113 2125Right-handed alpha
Helix 52
AF7
D
2126 2153Right-handed alpha
Helix 53
AF8
D
2156 2161Right-handed alpha
Helix 54
AF9
D
2162 2176Right-handed alpha
Helix 55
AG1
D
2183 2191Right-handed alpha
Helix 56
AG2
D
2194 2262Right-handed alpha
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There are no sheets in PDB entry 5VB2
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