Analysis of interatomic Contacts of Structural Units in PDB entry:
5VB8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5VB8 entry

There is 1 chain in PDB entry 5VB8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 999ASP 1219
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5VB8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
999 1010Right-handed alpha
Helix 2
AA2
A
1011 1032Right-handed alpha
Helix 3
AA3
A
1034 1068Right-handed alpha
Helix 4
AA4
A
1068 1073Right-handed alpha
Helix 5
AA5
A
1074 1089Right-handed alpha
Helix 6
AA6
A
1097 1102Right-handed alpha
Helix 7
AA7
A
1103 1106Right-handed 310
Helix 8
AA8
A
1107 1112Right-handed alpha
Helix 9
AA9
A
1113 1153Right-handed alpha
Helix 10
AB1
A
1156 1161Right-handed alpha
Helix 11
AB2
A
1162 1175Right-handed alpha
Helix 12
AB3
A
1183 1189Right-handed alpha
Helix 13
AB4
A
1193 1215Right-handed alpha
Helix 14
AB5
A
1216 1219Right-handed 310
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There are no sheets in PDB entry 5VB8
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