Analysis of interatomic Contacts of Structural Units in PDB entry:
5VE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5VE8 entry

There are 2 chains in PDB entry 5VE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 40ALA 1113
B
 ALA 40ALA 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are121 helices in PDB entry 5VE8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 51Right-handed alpha
Helix 2
AA2
A
53 67Right-handed alpha
Helix 3
AA3
A
79 94Right-handed alpha
Helix 4
AA4
A
96 114Right-handed alpha
Helix 5
AA5
A
122 131Right-handed alpha
Helix 6
AA6
A
135 152Right-handed alpha
Helix 7
AA7
A
153 159Right-handed 310
Helix 8
AA8
A
160 172Right-handed alpha
Helix 9
AA9
A
177 198Right-handed alpha
Helix 10
AB1
A
202 212Right-handed alpha
Helix 11
AB2
A
212 226Right-handed alpha
Helix 12
AB3
A
228 244Right-handed alpha
Helix 13
AB4
A
246 251Right-handed alpha
Helix 14
AB5
A
253 267Right-handed alpha
Helix 15
AB6
A
271 289Right-handed alpha
Helix 16
AB7
A
289 296Right-handed alpha
Helix 17
AB8
A
298 311Right-handed alpha
Helix 18
AB9
A
315 322Right-handed alpha
Helix 19
AC1
A
333 349Right-handed alpha
Helix 20
AC2
A
354 367Right-handed alpha
Helix 21
AC3
A
370 388Right-handed alpha
Helix 22
AC4
A
388 395Right-handed alpha
Helix 23
AC5
A
395 408Right-handed alpha
Helix 24
AC6
A
411 429Right-handed alpha
Helix 25
AC7
A
429 435Right-handed alpha
Helix 26
AC8
A
436 451Right-handed alpha
Helix 27
AC9
A
453 471Right-handed alpha
Helix 28
AD1
A
472 494Right-handed alpha
Helix 29
AD2
A
496 515Right-handed alpha
Helix 30
AD3
A
518 530Right-handed alpha
Helix 31
AD4
A
531 534Right-handed 310
Helix 32
AD5
A
543 564Right-handed alpha
Helix 33
AD6
A
565 586Right-handed alpha
Helix 34
AD7
A
588 607Right-handed alpha
Helix 35
AD8
A
608 612Right-handed 310
Helix 36
AD9
A
613 626Right-handed alpha
Helix 37
AE1
A
659 681Right-handed alpha
Helix 38
AE2
A
684 702Right-handed alpha
Helix 39
AE3
A
705 724Right-handed alpha
Helix 40
AE4
A
742 759Right-handed alpha
Helix 41
AE5
A
765 784Right-handed alpha
Helix 42
AE6
A
785 788Right-handed 310
Helix 43
AE7
A
794 809Right-handed alpha
Helix 44
AE8
A
832 854Right-handed alpha
Helix 45
AE9
A
857 872Right-handed alpha
Helix 46
AF1
A
876 895Right-handed alpha
Helix 47
AF2
A
896 898Right-handed 310
Helix 48
AF3
A
900 915Right-handed alpha
Helix 49
AF4
A
917 935Right-handed alpha
Helix 50
AF5
A
939 963Right-handed alpha
Helix 51
AF6
A
970 992Right-handed alpha
Helix 52
AF7
A
993 996Right-handed 310
Helix 53
AF8
A
997 1008Right-handed alpha
Helix 54
AF9
A
1014 1016Right-handed 310
Helix 55
AG1
A
1017 1031Right-handed alpha
Helix 56
AG2
A
1033 1038Right-handed alpha
Helix 57
AG3
A
1039 1064Right-handed alpha
Helix 58
AG4
A
1080 1097Right-handed alpha
Helix 59
AG5
A
1101 1104Right-handed 310
Helix 60
AG6
A
1105 1113Right-handed alpha
Helix 61
AG7
B
41 50Right-handed alpha
Helix 62
AG8
B
53 72Right-handed alpha
Helix 63
AG9
B
76 94Right-handed alpha
Helix 64
AH1
B
96 118Right-handed alpha
Helix 65
AH2
B
122 131Right-handed alpha
Helix 66
AH3
B
135 152Right-handed alpha
Helix 67
AH4
B
153 159Right-handed 310
Helix 68
AH5
B
160 172Right-handed alpha
Helix 69
AH6
B
177 197Right-handed alpha
Helix 70
AH7
B
202 227Right-handed alpha
Helix 71
AH8
B
228 245Right-handed alpha
Helix 72
AH9
B
246 251Right-handed alpha
Helix 73
AI1
B
252 267Right-handed alpha
Helix 74
AI2
B
271 289Right-handed alpha
Helix 75
AI3
B
289 297Right-handed alpha
Helix 76
AI4
B
298 311Right-handed alpha
Helix 77
AI5
B
315 322Right-handed alpha
Helix 78
AI6
B
333 349Right-handed alpha
Helix 79
AI7
B
354 361Right-handed alpha
Helix 80
AI8
B
361 368Right-handed alpha
Helix 81
AI9
B
370 388Right-handed alpha
Helix 82
AJ1
B
388 395Right-handed alpha
Helix 83
AJ2
B
395 408Right-handed alpha
Helix 84
AJ3
B
411 430Right-handed alpha
Helix 85
AJ4
B
430 435Right-handed alpha
Helix 86
AJ5
B
436 450Right-handed alpha
Helix 87
AJ6
B
453 470Right-handed alpha
Helix 88
AJ7
B
472 494Right-handed alpha
Helix 89
AJ8
B
496 515Right-handed alpha
Helix 90
AJ9
B
518 530Right-handed alpha
Helix 91
AK1
B
531 534Right-handed 310
Helix 92
AK2
B
543 564Right-handed alpha
Helix 93
AK3
B
565 585Right-handed alpha
Helix 94
AK4
B
588 607Right-handed alpha
Helix 95
AK5
B
608 612Right-handed 310
Helix 96
AK6
B
613 627Right-handed alpha
Helix 97
AK7
B
659 681Right-handed alpha
Helix 98
AK8
B
684 702Right-handed alpha
Helix 99
AK9
B
705 724Right-handed alpha
Helix 100
AL1
B
742 759Right-handed alpha
Helix 101
AL2
B
765 784Right-handed alpha
Helix 102
AL3
B
785 788Right-handed 310
Helix 103
AL4
B
794 810Right-handed alpha
Helix 104
AL5
B
832 854Right-handed alpha
Helix 105
AL6
B
856 872Right-handed alpha
Helix 106
AL7
B
876 895Right-handed alpha
Helix 107
AL8
B
896 898Right-handed 310
Helix 108
AL9
B
900 915Right-handed alpha
Helix 109
AM1
B
917 935Right-handed alpha
Helix 110
AM2
B
939 961Right-handed alpha
Helix 111
AM3
B
968 992Right-handed alpha
Helix 112
AM4
B
993 996Right-handed 310
Helix 113
AM5
B
997 1007Right-handed alpha
Helix 114
AM6
B
1014 1016Right-handed 310
Helix 115
AM7
B
1017 1031Right-handed alpha
Helix 116
AM8
B
1033 1039Right-handed alpha
Helix 117
AM9
B
1039 1064Right-handed alpha
Helix 118
AN1
B
1068 1072Right-handed 310
Helix 119
AN2
B
1080 1098Right-handed alpha
Helix 120
AN3
B
1100 1105Right-handed alpha
Helix 121
AN4
B
1105 1113Right-handed alpha
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There are no sheets in PDB entry 5VE8
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