Analysis of interatomic Contacts of Structural Units in PDB entry:
5VHU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5VHU entry

There is 1 chain in PDB entry 5VHU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 188
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5VHU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 26Right-handed alpha
Helix 2
AA2
A
31 42Right-handed alpha
Helix 3
AA3
A
51 68Right-handed alpha
Helix 4
AA4
A
77 82Right-handed alpha
Helix 5
AA5
A
83 88Right-handed 310
Helix 6
AA6
A
103 108Right-handed alpha
Helix 7
AA7
A
109 117Right-handed alpha
Helix 8
AA8
A
129 135Right-handed alpha
Helix 9
AA9
A
155 176Right-handed alpha
Helix 10
AB1
A
179 187Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5VHU.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 76first strand
Strand 2
A
46 50parallel
Strand 3
A
93 97parallel
Strand 4
A
120 124parallel
Strand 5
A
137 140parallel
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