Analysis of interatomic Contacts of Structural Units in PDB entry:
5VON


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5VON entry

There is 1 chain in PDB entry 5VON (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 367HIS 648
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5VON. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
380 390Right-handed alpha
Helix 2
AA2
A
391 405Right-handed alpha
Helix 3
AA3
A
420 436Right-handed alpha
Helix 4
AA4
A
446 457Right-handed alpha
Helix 5
AA5
A
471 486Right-handed alpha
Helix 6
AA6
A
502 520Right-handed alpha
Helix 7
AA7
A
524 526Right-handed 310
Helix 8
AA8
A
546 562Right-handed alpha
Helix 9
AA9
A
572 576Right-handed 310
Helix 10
AB1
A
579 597Right-handed alpha
Helix 11
AB2
A
605 609Right-handed 310
Helix 12
AB3
A
611 615Right-handed 310
Helix 13
AB4
A
616 628Right-handed alpha
Helix 14
AB5
A
636 645Right-handed alpha
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There are 2 sheets in PDB entry 5VON. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 376first strand
Strand 2
A
409 413parallel
Strand 3
A
440 443parallel
Strand 4
A
461 466parallel
Strand 5
A
488 492parallel
Strand 6
A
528 531parallel
Strand 7
A
566 570parallel
Strand 8
A
601 604parallel
Strand 9
A
369 376parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
494 495first strand
Strand 2
A
498 499anti-parallel
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