Analysis of interatomic Contacts of Structural Units in PDB entry:
5VX0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5VX0 entry

There are 6 chains in PDB entry 5VX0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 17ASN 185
B
 ASP 141ARG 154
B
 GLY 156ARG 165
C
 SER 21ASN 185
D
 MET 142ARG 154
D
 GLY 156ARG 165
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5VX0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 47Right-handed alpha
Helix 2
AA2
A
48 52Right-handed 310
Helix 3
AA3
A
57 62Right-handed alpha
Helix 4
AA4
A
69 82Right-handed alpha
Helix 5
AA5
A
82 89Right-handed alpha
Helix 6
AA6
A
89 101Right-handed alpha
Helix 7
AA7
A
106 119Right-handed alpha
Helix 8
AA8
A
124 145Right-handed alpha
Helix 9
AA9
A
150 165Right-handed alpha
Helix 10
AB1
A
166 174Right-handed alpha
Helix 11
AB2
A
175 183Right-handed 310
Helix 12
AB3
B
143 164Right-handed alpha
Helix 13
AB4
C
23 47Right-handed alpha
Helix 14
AB5
C
57 62Right-handed alpha
Helix 15
AB6
C
69 82Right-handed alpha
Helix 16
AB7
C
82 89Right-handed alpha
Helix 17
AB8
C
89 101Right-handed alpha
Helix 18
AB9
C
106 121Right-handed alpha
Helix 19
AC1
C
124 145Right-handed alpha
Helix 20
AC2
C
150 165Right-handed alpha
Helix 21
AC3
C
166 173Right-handed alpha
Helix 22
AC4
C
174 175Right-handed 310
Helix 23
AC5
C
176 183Right-handed 310
Helix 24
AC6
D
143 164Right-handed alpha
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There are no sheets in PDB entry 5VX0
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il