Analysis of interatomic Contacts of Structural Units in PDB entry:
5VX2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5VX2 entry

There are 6 chains in PDB entry 5VX2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 172GLU 322
B
 ARG 53ARG 64
B
 GLY 66ARG 75
C
 ASP 172VAL 321
D
 ASP 51ARG 64
D
 GLY 66ARG 75
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 5VX2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
172 192Right-handed alpha
Helix 2
AA2
A
204 236Right-handed alpha
Helix 3
AA3
A
239 241Right-handed 310
Helix 4
AA4
A
242 254Right-handed alpha
Helix 5
AA5
A
255 257Right-handed 310
Helix 6
AA6
A
260 281Right-handed alpha
Helix 7
AA7
A
283 285Right-handed 310
Helix 8
AA8
A
286 309Right-handed alpha
Helix 9
AA9
A
310 319Right-handed alpha
Helix 10
AB1
B
54 75Right-handed alpha
Helix 11
AB2
C
173 192Right-handed alpha
Helix 12
AB3
C
202 236Right-handed alpha
Helix 13
AB4
C
240 242Right-handed 310
Helix 14
AB5
C
243 254Right-handed alpha
Helix 15
AB6
C
255 257Right-handed 310
Helix 16
AB7
C
260 281Right-handed alpha
Helix 17
AB8
C
283 285Right-handed 310
Helix 18
AB9
C
286 309Right-handed alpha
Helix 19
AC1
C
310 319Right-handed alpha
Helix 20
AC2
D
52 75Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5VX2
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il