Analysis of interatomic Contacts of Structural Units in PDB entry:
5VX3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5VX3 entry

There are 12 chains in PDB entry 5VX3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 196
B
 MET 84ARG 96
B
 GLY 98THR 104
C
 SER 0GLY 196
D
 ARG 85ARG 96
D
 GLY 98ALA 106
E
 GLY -4ASN 197
F
 ARG 85ARG 96
F
 GLY 98ALA 106
G
 GLY -4ASN 197
H
 MET 84ARG 96
H
 GLY 98ALA 106
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5VX3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 20Right-handed alpha
Helix 2
AA2
A
25 102Right-handed alpha
Helix 3
AA3
A
103 106Right-handed 310
Helix 4
AA4
A
109 113Right-handed 310
Helix 5
AA5
A
118 131Right-handed alpha
Helix 6
AA6
A
136 157Right-handed alpha
Helix 7
AA7
A
161 178Right-handed alpha
Helix 8
AA8
A
178 185Right-handed alpha
Helix 9
AA9
A
186 196Right-handed alpha
Helix 10
AB1
B
85 104Right-handed alpha
Helix 11
AB2
C
1 20Right-handed alpha
Helix 12
AB3
C
25 101Right-handed alpha
Helix 13
AB4
C
102 106Right-handed 310
Helix 14
AB5
C
109 113Right-handed 310
Helix 15
AB6
C
118 131Right-handed alpha
Helix 16
AB7
C
136 157Right-handed alpha
Helix 17
AB8
C
161 178Right-handed alpha
Helix 18
AB9
C
178 185Right-handed alpha
Helix 19
AC1
C
186 196Right-handed alpha
Helix 20
AC2
D
86 105Right-handed alpha
Helix 21
AC3
E
0 20Right-handed alpha
Helix 22
AC4
E
25 101Right-handed alpha
Helix 23
AC5
E
102 106Right-handed 310
Helix 24
AC6
E
107 112Right-handed alpha
Helix 25
AC7
E
115 131Right-handed alpha
Helix 26
AC8
E
136 157Right-handed alpha
Helix 27
AC9
E
161 178Right-handed alpha
Helix 28
AD1
E
178 185Right-handed alpha
Helix 29
AD2
E
186 196Right-handed alpha
Helix 30
AD3
F
86 106Right-handed alpha
Helix 31
AD4
G
0 20Right-handed alpha
Helix 32
AD5
G
25 101Right-handed alpha
Helix 33
AD6
G
102 106Right-handed 310
Helix 34
AD7
G
107 113Right-handed alpha
Helix 35
AD8
G
118 131Right-handed alpha
Helix 36
AD9
G
136 157Right-handed alpha
Helix 37
AE1
G
161 178Right-handed alpha
Helix 38
AE2
G
178 185Right-handed alpha
Helix 39
AE3
G
186 196Right-handed alpha
Helix 40
AE4
H
85 106Right-handed alpha
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There are no sheets in PDB entry 5VX3
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