Analysis of interatomic Contacts of Structural Units in PDB entry:
5W07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W07 entry

There is 1 chain in PDB entry 5W07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5LEU 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5W07. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 35Right-handed alpha
Helix 2
AA2
A
46 55Right-handed alpha
Helix 3
AA3
A
70 86Right-handed alpha
Helix 4
AA4
A
102 106Right-handed 310
Helix 5
AA5
A
110 114Right-handed 310
Helix 6
AA6
A
115 127Right-handed alpha
Helix 7
AA7
A
127 138Right-handed alpha
Helix 8
AA8
A
161 183Right-handed alpha
Helix 9
AA9
A
184 186Right-handed 310
Helix 10
AB1
A
199 208Right-handed alpha
Helix 11
AB2
A
214 229Right-handed alpha
Helix 12
AB3
A
238 250Right-handed alpha
Helix 13
AB4
A
266 270Right-handed 310
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There is 1 sheet (AA1) in PDB entry 5W07.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
38 43parallel
Strand 3
A
12 15parallel
Strand 4
A
91 96parallel
Strand 5
A
141 151parallel
Strand 6
A
188 194parallel
Strand 7
A
259 263parallel
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