Analysis of interatomic Contacts of Structural Units in PDB entry:
5W0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W0X entry

There is 1 chain in PDB entry 5W0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11ARG 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 5W0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 40Right-handed alpha
Helix 2
AA2
A
69 74Right-handed alpha
Helix 3
AA3
A
159 162Right-handed 310
Helix 4
AA4
A
222 224Right-handed 310
Helix 5
AA5
A
228 233Right-handed 310
Helix 6
AA6
A
234 239Right-handed alpha
Helix 7
AA7
A
240 242Right-handed 310
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There are 2 sheets in PDB entry 5W0X. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
18 23anti-parallel
Strand 3
A
54 59anti-parallel
Strand 4
A
64 68anti-parallel
Strand 5
A
119 121anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
149 158anti-parallel
Strand 3
A
164 174anti-parallel
Strand 4
A
178 189anti-parallel
Strand 5
A
193 204anti-parallel
Strand 6
A
209 220anti-parallel
Strand 7
A
244 253anti-parallel
Strand 8
A
128 131anti-parallel
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