Analysis of interatomic Contacts of Structural Units in PDB entry:
5W1R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W1R entry

There is 1 chain in PDB entry 5W1R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 8TRP 4127
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are221 helices in PDB entry 5W1R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 20Right-handed alpha
Helix 2
AA2
A
31 44Right-handed alpha
Helix 3
AA3
A
50 65Right-handed alpha
Helix 4
AA4
A
74 96Right-handed alpha
Helix 5
AA5
A
100 118Right-handed alpha
Helix 6
AA6
A
128 140Right-handed alpha
Helix 7
AA7
A
147 162Right-handed alpha
Helix 8
AA8
A
170 185Right-handed alpha
Helix 9
AA9
A
191 206Right-handed alpha
Helix 10
AB1
A
216 230Right-handed alpha
Helix 11
AB2
A
239 248Right-handed alpha
Helix 12
AB3
A
248 253Right-handed alpha
Helix 13
AB4
A
259 263Right-handed 310
Helix 14
AB5
A
265 275Right-handed alpha
Helix 15
AB6
A
275 284Right-handed alpha
Helix 16
AB7
A
290 302Right-handed alpha
Helix 17
AB8
A
308 329Right-handed alpha
Helix 18
AB9
A
335 352Right-handed alpha
Helix 19
AC1
A
359 366Right-handed alpha
Helix 20
AC2
A
373 378Right-handed 310
Helix 21
AC3
A
382 398Right-handed alpha
Helix 22
AC4
A
399 401Right-handed 310
Helix 23
AC5
A
409 422Right-handed alpha
Helix 24
AC6
A
431 445Right-handed alpha
Helix 25
AC7
A
450 472Right-handed alpha
Helix 26
AC8
A
473 489Right-handed alpha
Helix 27
AC9
A
533 539Right-handed alpha
Helix 28
AD1
A
547 564Right-handed alpha
Helix 29
AD2
A
570 582Right-handed alpha
Helix 30
AD3
A
588 595Right-handed alpha
Helix 31
AD4
A
606 611Right-handed alpha
Helix 32
AD5
A
611 622Right-handed alpha
Helix 33
AD6
A
632 638Right-handed alpha
Helix 34
AD7
A
638 649Right-handed alpha
Helix 35
AD8
A
653 660Right-handed alpha
Helix 36
AD9
A
660 665Right-handed alpha
Helix 37
AE1
A
670 676Right-handed alpha
Helix 38
AE2
A
677 682Right-handed alpha
Helix 39
AE3
A
698 713Right-handed alpha
Helix 40
AE4
A
714 719Right-handed alpha
Helix 41
AE5
A
724 729Right-handed alpha
Helix 42
AE6
A
741 749Right-handed alpha
Helix 43
AE7
A
750 755Right-handed alpha
Helix 44
AE8
A
770 782Right-handed alpha
Helix 45
AE9
A
788 801Right-handed alpha
Helix 46
AF1
A
802 805Right-handed 310
Helix 47
AF2
A
847 860Right-handed alpha
Helix 48
AF3
A
866 877Right-handed alpha
Helix 49
AF4
A
909 920Right-handed alpha
Helix 50
AF5
A
921 923Right-handed 310
Helix 51
AF6
A
924 945Right-handed alpha
Helix 52
AF7
A
956 961Right-handed alpha
Helix 53
AF8
A
966 976Right-handed alpha
Helix 54
AF9
A
978 991Right-handed alpha
Helix 55
AG1
A
991 999Right-handed alpha
Helix 56
AG2
A
1003 1012Right-handed alpha
Helix 57
AG3
A
1013 1014Right-handed 310
Helix 58
AG4
A
1015 1019Right-handed 310
Helix 59
AG5
A
1021 1030Right-handed alpha
Helix 60
AG6
A
1031 1041Right-handed alpha
Helix 61
AG7
A
1055 1068Right-handed alpha
Helix 62
AG8
A
1068 1073Right-handed alpha
Helix 63
AG9
A
1077 1092Right-handed alpha
Helix 64
AH1
A
1095 1100Right-handed alpha
Helix 65
AH2
A
1100 1117Right-handed alpha
Helix 66
AH3
A
1124 1137Right-handed alpha
Helix 67
AH4
A
1146 1151Right-handed alpha
Helix 68
AH5
A
1151 1156Right-handed alpha
Helix 69
AH6
A
1168 1177Right-handed alpha
Helix 70
AH7
A
1216 1225Right-handed alpha
Helix 71
AH8
A
1252 1265Right-handed alpha
Helix 72
AH9
A
1266 1270Right-handed 310
Helix 73
AI1
A
1287 1305Right-handed alpha
Helix 74
AI2
A
1324 1350Right-handed alpha
Helix 75
AI3
A
1368 1373Right-handed alpha
Helix 76
AI4
A
1377 1382Right-handed alpha
Helix 77
AI5
A
1390 1408Right-handed alpha
Helix 78
AI6
A
1411 1420Right-handed alpha
Helix 79
AI7
A
1423 1428Right-handed alpha
Helix 80
AI8
A
1428 1433Right-handed alpha
Helix 81
AI9
A
1442 1457Right-handed alpha
Helix 82
AJ1
A
1458 1461Right-handed 310
Helix 83
AJ2
A
1477 1486Right-handed alpha
Helix 84
AJ3
A
1506 1511Right-handed alpha
Helix 85
AJ4
A
1513 1521Right-handed alpha
Helix 86
AJ5
A
1522 1526Right-handed 310
Helix 87
AJ6
A
1549 1556Right-handed alpha
Helix 88
AJ7
A
1560 1566Right-handed alpha
Helix 89
AJ8
A
1567 1576Right-handed alpha
Helix 90
AJ9
A
1580 1588Right-handed alpha
Helix 91
AK1
A
1593 1608Right-handed alpha
Helix 92
AK2
A
1638 1643Right-handed alpha
Helix 93
AK3
A
1651 1656Right-handed alpha
Helix 94
AK4
A
1677 1695Right-handed alpha
Helix 95
AK5
A
1698 1702Right-handed 310
Helix 96
AK6
A
1710 1721Right-handed alpha
Helix 97
AK7
A
1738 1752Right-handed alpha
Helix 98
AK8
A
1802 1807Right-handed alpha
Helix 99
AK9
A
1858 1872Right-handed alpha
Helix 100
AL1
A
1873 1877Right-handed 310
Helix 101
AL2
A
1879 1881Right-handed 310
Helix 102
AL3
A
1882 1890Right-handed alpha
Helix 103
AL4
A
1895 1909Right-handed alpha
Helix 104
AL5
A
1915 1928Right-handed alpha
Helix 105
AL6
A
1935 1950Right-handed alpha
Helix 106
AL7
A
1957 1969Right-handed alpha
Helix 107
AL8
A
1979 1999Right-handed alpha
Helix 108
AL9
A
2002 2011Right-handed alpha
Helix 109
AM1
A
2011 2021Right-handed alpha
Helix 110
AM2
A
2036 2044Right-handed alpha
Helix 111
AM3
A
2044 2049Right-handed alpha
Helix 112
AM4
A
2049 2054Right-handed alpha
Helix 113
AM5
A
2074 2081Right-handed alpha
Helix 114
AM6
A
2081 2090Right-handed alpha
Helix 115
AM7
A
2093 2105Right-handed alpha
Helix 116
AM8
A
2118 2122Right-handed alpha
Helix 117
AM9
A
2137 2148Right-handed alpha
Helix 118
AN1
A
2152 2156Right-handed 310
Helix 119
AN2
A
2157 2165Right-handed alpha
Helix 120
AN3
A
2169 2174Right-handed alpha
Helix 121
AN4
A
2181 2193Right-handed alpha
Helix 122
AN5
A
2196 2201Right-handed alpha
Helix 123
AN6
A
2209 2223Right-handed alpha
Helix 124
AN7
A
2232 2245Right-handed alpha
Helix 125
AN8
A
2250 2260Right-handed alpha
Helix 126
AN9
A
2270 2275Right-handed alpha
Helix 127
AO1
A
2275 2280Right-handed alpha
Helix 128
AO2
A
2288 2297Right-handed alpha
Helix 129
AO3
A
2298 2308Right-handed alpha
Helix 130
AO4
A
2315 2333Right-handed alpha
Helix 131
AO5
A
2338 2351Right-handed alpha
Helix 132
AO6
A
2357 2365Right-handed alpha
Helix 133
AO7
A
2366 2370Right-handed 310
Helix 134
AO8
A
2378 2385Right-handed alpha
Helix 135
AO9
A
2393 2407Right-handed alpha
Helix 136
AP1
A
2415 2425Right-handed alpha
Helix 137
AP2
A
2430 2433Right-handed 310
Helix 138
AP3
A
2434 2440Right-handed alpha
Helix 139
AP4
A
2441 2443Right-handed 310
Helix 140
AP5
A
2447 2461Right-handed alpha
Helix 141
AP6
A
2469 2483Right-handed alpha
Helix 142
AP7
A
2494 2509Right-handed alpha
Helix 143
AP8
A
2515 2526Right-handed alpha
Helix 144
AP9
A
2535 2547Right-handed alpha
Helix 145
AQ1
A
2554 2566Right-handed alpha
Helix 146
AQ2
A
2787 2792Right-handed alpha
Helix 147
AQ3
A
2792 2801Right-handed alpha
Helix 148
AQ4
A
2806 2818Right-handed alpha
Helix 149
AQ5
A
2818 2823Right-handed alpha
Helix 150
AQ6
A
2825 2842Right-handed alpha
Helix 151
AQ7
A
2842 2847Right-handed alpha
Helix 152
AQ8
A
2856 2862Right-handed alpha
Helix 153
AQ9
A
2876 2883Right-handed alpha
Helix 154
AR1
A
2887 2895Right-handed alpha
Helix 155
AR2
A
2916 2922Right-handed alpha
Helix 156
AR3
A
2930 2939Right-handed alpha
Helix 157
AR4
A
2946 2957Right-handed alpha
Helix 158
AR5
A
2960 2968Right-handed alpha
Helix 159
AR6
A
2970 2975Right-handed alpha
Helix 160
AR7
A
2985 2990Right-handed alpha
Helix 161
AR8
A
2990 3002Right-handed alpha
Helix 162
AR9
A
3007 3017Right-handed alpha
Helix 163
AS1
A
3025 3032Right-handed alpha
Helix 164
AS2
A
3037 3039Right-handed 310
Helix 165
AS3
A
3040 3047Right-handed alpha
Helix 166
AS4
A
3047 3054Right-handed alpha
Helix 167
AS5
A
3060 3071Right-handed alpha
Helix 168
AS6
A
3075 3080Right-handed alpha
Helix 169
AS7
A
3083 3090Right-handed alpha
Helix 170
AS8
A
3096 3114Right-handed alpha
Helix 171
AS9
A
3119 3130Right-handed alpha
Helix 172
AT1
A
3130 3146Right-handed alpha
Helix 173
AT2
A
3146 3155Right-handed alpha
Helix 174
AT3
A
3156 3168Right-handed alpha
Helix 175
AT4
A
3177 3195Right-handed alpha
Helix 176
AT5
A
3228 3245Right-handed alpha
Helix 177
AT6
A
3246 3249Right-handed 310
Helix 178
AT7
A
3253 3265Right-handed alpha
Helix 179
AT8
A
3268 3287Right-handed alpha
Helix 180
AT9
A
3291 3312Right-handed alpha
Helix 181
AU1
A
3315 3334Right-handed alpha
Helix 182
AU2
A
3346 3353Right-handed alpha
Helix 183
AU3
A
3353 3358Right-handed alpha
Helix 184
AU4
A
3380 3394Right-handed alpha
Helix 185
AU5
A
3395 3401Right-handed 310
Helix 186
AU6
A
3407 3427Right-handed alpha
Helix 187
AU7
A
3433 3440Right-handed alpha
Helix 188
AU8
A
3442 3444Right-handed 310
Helix 189
AU9
A
3445 3450Right-handed alpha
Helix 190
AV1
A
3459 3472Right-handed alpha
Helix 191
AV2
A
3475 3485Right-handed alpha
Helix 192
AV3
A
3498 3508Right-handed alpha
Helix 193
AV4
A
3511 3523Right-handed alpha
Helix 194
AV5
A
3529 3539Right-handed alpha
Helix 195
AV6
A
3548 3561Right-handed alpha
Helix 196
AV7
A
3568 3580Right-handed alpha
Helix 197
AV8
A
3581 3593Right-handed alpha
Helix 198
AV9
A
3603 3613Right-handed alpha
Helix 199
AW1
A
3622 3627Right-handed alpha
Helix 200
AW2
A
3631 3648Right-handed alpha
Helix 201
AW3
A
3658 3675Right-handed alpha
Helix 202
AW4
A
3686 3690Right-handed 310
Helix 203
AW5
A
3693 3697Right-handed 310
Helix 204
AW6
A
3759 3772Right-handed alpha
Helix 205
AW7
A
3778 3784Right-handed alpha
Helix 206
AW8
A
3812 3818Right-handed alpha
Helix 207
AW9
A
3820 3847Right-handed alpha
Helix 208
AX1
A
3860 3877Right-handed alpha
Helix 209
AX2
A
3877 3890Right-handed alpha
Helix 210
AX3
A
3896 3919Right-handed alpha
Helix 211
AX4
A
3947 3952Right-handed alpha
Helix 212
AX5
A
3964 3972Right-handed alpha
Helix 213
AX6
A
3979 3993Right-handed alpha
Helix 214
AX7
A
3995 4006Right-handed alpha
Helix 215
AX8
A
4015 4020Right-handed alpha
Helix 216
AX9
A
4041 4052Right-handed alpha
Helix 217
AY1
A
4058 4066Right-handed alpha
Helix 218
AY2
A
4072 4082Right-handed alpha
Helix 219
AY3
A
4082 4087Right-handed alpha
Helix 220
AY4
A
4101 4113Right-handed alpha
Helix 221
AY5
A
4113 4119Right-handed alpha
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There are 3 sheets in PDB entry 5W1R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3719 3722first strand
Strand 2
A
3736 3742anti-parallel
Strand 3
A
3727 3728anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3719 3722first strand
Strand 2
A
3736 3742anti-parallel
Strand 3
A
3747 3752anti-parallel
Strand 4
A
3800 3804anti-parallel
Strand 5
A
3794 3796anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3809 3811first strand
Strand 2
A
3929 3931anti-parallel
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