Analysis of interatomic Contacts of Structural Units in PDB entry:
5W4M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W4M entry

There are 2 chains in PDB entry 5W4M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3VAL 274
B
 LYS 3ASP 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 5W4M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 16Right-handed alpha
Helix 2
AA2
A
19 24Right-handed alpha
Helix 3
AA3
A
29 38Right-handed alpha
Helix 4
AA4
A
44 56Right-handed alpha
Helix 5
AA5
A
58 66Right-handed alpha
Helix 6
AA6
A
71 86Right-handed alpha
Helix 7
AA7
A
88 99Right-handed alpha
Helix 8
AA8
A
102 115Right-handed alpha
Helix 9
AA9
A
123 137Right-handed alpha
Helix 10
AB1
A
141 152Right-handed alpha
Helix 11
AB2
A
153 155Right-handed 310
Helix 12
AB3
A
156 170Right-handed alpha
Helix 13
AB4
A
178 198Right-handed alpha
Helix 14
AB5
A
200 216Right-handed alpha
Helix 15
AB6
A
220 238Right-handed alpha
Helix 16
AB7
A
241 257Right-handed alpha
Helix 17
AB8
A
259 272Right-handed alpha
Helix 18
AB9
B
4 16Right-handed alpha
Helix 19
AC1
B
19 24Right-handed alpha
Helix 20
AC2
B
29 38Right-handed alpha
Helix 21
AC3
B
44 55Right-handed alpha
Helix 22
AC4
B
58 67Right-handed alpha
Helix 23
AC5
B
71 86Right-handed alpha
Helix 24
AC6
B
88 99Right-handed alpha
Helix 25
AC7
B
102 115Right-handed alpha
Helix 26
AC8
B
123 137Right-handed alpha
Helix 27
AC9
B
141 151Right-handed alpha
Helix 28
AD1
B
152 155Right-handed 310
Helix 29
AD2
B
156 170Right-handed alpha
Helix 30
AD3
B
178 198Right-handed alpha
Helix 31
AD4
B
200 216Right-handed alpha
Helix 32
AD5
B
220 238Right-handed alpha
Helix 33
AD6
B
241 257Right-handed alpha
Helix 34
AD7
B
259 275Right-handed alpha
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There are no sheets in PDB entry 5W4M
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