Analysis of interatomic Contacts of Structural Units in PDB entry:
5W58


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W58 entry

There is 1 chain in PDB entry 5W58 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 33THR 588
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5W58. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 83Right-handed alpha
Helix 2
AA2
A
85 94Right-handed alpha
Helix 3
AA3
A
96 105Right-handed alpha
Helix 4
AA4
A
105 122Right-handed alpha
Helix 5
AA5
A
138 144Right-handed alpha
Helix 6
AA6
A
173 182Right-handed alpha
Helix 7
AA7
A
195 207Right-handed alpha
Helix 8
AA8
A
230 235Right-handed alpha
Helix 9
AA9
A
237 245Right-handed alpha
Helix 10
AB1
A
265 270Right-handed alpha
Helix 11
AB2
A
280 284Right-handed 310
Helix 12
AB3
A
291 294Right-handed 310
Helix 13
AB4
A
295 320Right-handed alpha
Helix 14
AB5
A
324 347Right-handed alpha
Helix 15
AB6
A
347 354Right-handed alpha
Helix 16
AB7
A
362 367Right-handed 310
Helix 17
AB8
A
378 385Right-handed alpha
Helix 18
AB9
A
386 391Right-handed 310
Helix 19
AC1
A
403 408Right-handed alpha
Helix 20
AC2
A
410 429Right-handed alpha
Helix 21
AC3
A
441 443Right-handed 310
Helix 22
AC4
A
444 458Right-handed alpha
Helix 23
AC5
A
462 470Right-handed alpha
Helix 24
AC6
A
477 483Right-handed alpha
Helix 25
AC7
A
485 496Right-handed alpha
Helix 26
AC8
A
497 501Right-handed 310
Helix 27
AC9
A
502 510Right-handed alpha
Helix 28
AD1
A
519 536Right-handed alpha
Helix 29
AD2
A
537 541Right-handed 310
Helix 30
AD3
A
546 551Right-handed 310
Helix 31
AD4
A
552 561Right-handed alpha
Helix 32
AD5
A
563 572Right-handed alpha
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There are 5 sheets in PDB entry 5W58. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 49first strand
Strand 2
A
55 58anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
71 72anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
149 150anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 257first strand
Strand 2
A
260 262anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 397first strand
Strand 2
A
400 402anti-parallel
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