Analysis of interatomic Contacts of Structural Units in PDB entry:
5W6Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W6Y entry

There are 2 chains in PDB entry 5W6Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 73ASP 316
B
 GLU 69ASP 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5W6Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 95Right-handed alpha
Helix 2
AA2
A
100 105Right-handed 310
Helix 3
AA3
A
117 133Right-handed alpha
Helix 4
AA4
A
134 138Right-handed 310
Helix 5
AA5
A
145 149Right-handed 310
Helix 6
AA6
A
172 183Right-handed alpha
Helix 7
AA7
A
184 189Right-handed alpha
Helix 8
AA8
A
196 217Right-handed alpha
Helix 9
AA9
A
217 229Right-handed alpha
Helix 10
AB1
A
230 239Right-handed alpha
Helix 11
AB2
A
241 249Right-handed alpha
Helix 12
AB3
A
252 256Right-handed 310
Helix 13
AB4
A
257 269Right-handed alpha
Helix 14
AB5
A
278 282Right-handed 310
Helix 15
AB6
A
287 299Right-handed alpha
Helix 16
AB7
A
299 313Right-handed alpha
Helix 17
AB8
B
72 95Right-handed alpha
Helix 18
AB9
B
100 105Right-handed 310
Helix 19
AC1
B
117 133Right-handed alpha
Helix 20
AC2
B
134 138Right-handed 310
Helix 21
AC3
B
145 149Right-handed 310
Helix 22
AC4
B
164 170Right-handed 310
Helix 23
AC5
B
172 183Right-handed alpha
Helix 24
AC6
B
183 189Right-handed alpha
Helix 25
AC7
B
196 229Right-handed alpha
Helix 26
AC8
B
230 239Right-handed alpha
Helix 27
AC9
B
241 250Right-handed alpha
Helix 28
AD1
B
251 268Right-handed alpha
Helix 29
AD2
B
287 298Right-handed alpha
Helix 30
AD3
B
298 312Right-handed alpha
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There are no sheets in PDB entry 5W6Y
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il