Analysis of interatomic Contacts of Structural Units in PDB entry:
5W7B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W7B entry

There are 4 chains in PDB entry 5W7B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 36LYS 129
C
 CYS 159HIS 575
B
 ASP 36PRO 128
D
 CYS 159HIS 575
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 5W7B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 57Right-handed alpha
Helix 2
AA2
A
60 72Right-handed alpha
Helix 3
AA3
A
74 76Right-handed 310
Helix 4
AA4
A
77 95Right-handed alpha
Helix 5
AA5
A
102 110Right-handed alpha
Helix 6
AA6
C
161 178Right-handed alpha
Helix 7
AA7
C
218 223Right-handed 310
Helix 8
AA8
C
242 249Right-handed alpha
Helix 9
AA9
C
261 266Right-handed alpha
Helix 10
AB1
C
270 274Right-handed 310
Helix 11
AB2
C
275 279Right-handed 310
Helix 12
AB3
C
286 293Right-handed alpha
Helix 13
AB4
C
297 301Right-handed 310
Helix 14
AB5
C
317 326Right-handed alpha
Helix 15
AB6
C
327 330Right-handed 310
Helix 16
AB7
C
345 353Right-handed alpha
Helix 17
AB8
C
381 386Right-handed alpha
Helix 18
AB9
C
388 405Right-handed alpha
Helix 19
AC1
C
422 429Right-handed alpha
Helix 20
AC2
C
433 437Right-handed 310
Helix 21
AC3
C
443 454Right-handed alpha
Helix 22
AC4
C
466 491Right-handed alpha
Helix 23
AC5
C
504 515Right-handed alpha
Helix 24
AC6
C
518 523Right-handed 310
Helix 25
AC7
C
532 551Right-handed alpha
Helix 26
AC8
C
551 556Right-handed alpha
Helix 27
AC9
C
561 570Right-handed alpha
Helix 28
AD1
B
37 57Right-handed alpha
Helix 29
AD2
B
60 72Right-handed alpha
Helix 30
AD3
B
74 76Right-handed 310
Helix 31
AD4
B
77 95Right-handed alpha
Helix 32
AD5
B
102 110Right-handed alpha
Helix 33
AD6
D
161 178Right-handed alpha
Helix 34
AD7
D
218 223Right-handed 310
Helix 35
AD8
D
242 249Right-handed alpha
Helix 36
AD9
D
261 266Right-handed alpha
Helix 37
AE1
D
270 274Right-handed 310
Helix 38
AE2
D
275 279Right-handed 310
Helix 39
AE3
D
286 293Right-handed alpha
Helix 40
AE4
D
297 301Right-handed 310
Helix 41
AE5
D
317 326Right-handed alpha
Helix 42
AE6
D
327 330Right-handed 310
Helix 43
AE7
D
345 353Right-handed alpha
Helix 44
AE8
D
381 386Right-handed alpha
Helix 45
AE9
D
388 404Right-handed alpha
Helix 46
AF1
D
422 429Right-handed alpha
Helix 47
AF2
D
433 437Right-handed 310
Helix 48
AF3
D
443 454Right-handed alpha
Helix 49
AF4
D
466 491Right-handed alpha
Helix 50
AF5
D
504 515Right-handed alpha
Helix 51
AF6
D
518 523Right-handed 310
Helix 52
AF7
D
532 551Right-handed alpha
Helix 53
AF8
D
551 556Right-handed alpha
Helix 54
AF9
D
561 570Right-handed alpha
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There are 2 sheets in PDB entry 5W7B. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
333 335first strand
Strand 2
C
255 260parallel
Strand 3
C
363 368parallel
Strand 4
C
411 416parallel
Strand 5
C
496 501parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
333 335first strand
Strand 2
D
255 260parallel
Strand 3
D
363 368parallel
Strand 4
D
411 416parallel
Strand 5
D
496 501parallel
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