Analysis of interatomic Contacts of Structural Units in PDB entry:
5W7C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W7C entry

There are 4 chains in PDB entry 5W7C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 35LYS 145
C
 GLY 156HIS 575
B
 LEU 35LYS 145
D
 SER 157HIS 575
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 5W7C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 58Right-handed alpha
Helix 2
AA2
A
61 73Right-handed alpha
Helix 3
AA3
A
75 77Right-handed 310
Helix 4
AA4
A
78 100Right-handed alpha
Helix 5
AA5
A
103 111Right-handed alpha
Helix 6
AA6
A
129 144Right-handed alpha
Helix 7
AA7
C
158 162Right-handed 310
Helix 8
AA8
C
164 179Right-handed alpha
Helix 9
AA9
C
220 224Right-handed 310
Helix 10
AB1
C
243 250Right-handed alpha
Helix 11
AB2
C
271 275Right-handed 310
Helix 12
AB3
C
276 280Right-handed 310
Helix 13
AB4
C
281 286Right-handed 310
Helix 14
AB5
C
287 294Right-handed alpha
Helix 15
AB6
C
298 302Right-handed 310
Helix 16
AB7
C
318 327Right-handed alpha
Helix 17
AB8
C
328 331Right-handed 310
Helix 18
AB9
C
346 354Right-handed 310
Helix 19
AC1
C
388 405Right-handed alpha
Helix 20
AC2
C
422 429Right-handed alpha
Helix 21
AC3
C
433 437Right-handed 310
Helix 22
AC4
C
443 455Right-handed alpha
Helix 23
AC5
C
466 491Right-handed alpha
Helix 24
AC6
C
504 515Right-handed alpha
Helix 25
AC7
C
518 523Right-handed 310
Helix 26
AC8
C
532 551Right-handed alpha
Helix 27
AC9
C
551 556Right-handed alpha
Helix 28
AD1
C
561 570Right-handed alpha
Helix 29
AD2
B
37 58Right-handed alpha
Helix 30
AD3
B
61 73Right-handed alpha
Helix 31
AD4
B
75 77Right-handed 310
Helix 32
AD5
B
78 100Right-handed alpha
Helix 33
AD6
B
103 111Right-handed alpha
Helix 34
AD7
B
129 131Right-handed 310
Helix 35
AD8
B
132 144Right-handed alpha
Helix 36
AD9
D
158 162Right-handed 310
Helix 37
AE1
D
164 179Right-handed alpha
Helix 38
AE2
D
219 224Right-handed 310
Helix 39
AE3
D
243 249Right-handed alpha
Helix 40
AE4
D
271 275Right-handed 310
Helix 41
AE5
D
287 294Right-handed alpha
Helix 42
AE6
D
298 302Right-handed 310
Helix 43
AE7
D
318 327Right-handed alpha
Helix 44
AE8
D
328 331Right-handed 310
Helix 45
AE9
D
346 354Right-handed 310
Helix 46
AF1
D
382 386Right-handed 310
Helix 47
AF2
D
388 405Right-handed alpha
Helix 48
AF3
D
422 429Right-handed alpha
Helix 49
AF4
D
433 437Right-handed 310
Helix 50
AF5
D
443 455Right-handed alpha
Helix 51
AF6
D
466 491Right-handed alpha
Helix 52
AF7
D
504 515Right-handed alpha
Helix 53
AF8
D
518 523Right-handed 310
Helix 54
AF9
D
532 551Right-handed alpha
Helix 55
AG1
D
551 556Right-handed alpha
Helix 56
AG2
D
561 570Right-handed alpha
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There are 2 sheets in PDB entry 5W7C. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
334 338first strand
Strand 2
C
256 261parallel
Strand 3
C
364 369parallel
Strand 4
C
411 416parallel
Strand 5
C
496 501parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
334 338first strand
Strand 2
D
256 261parallel
Strand 3
D
364 369parallel
Strand 4
D
411 416parallel
Strand 5
D
496 501parallel
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