Analysis of interatomic Contacts of Structural Units in PDB entry:
5W7D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W7D entry

There is 1 chain in PDB entry 5W7D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 35HIS 574
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5W7D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 58Right-handed alpha
Helix 2
AA2
A
60 72Right-handed alpha
Helix 3
AA3
A
74 76Right-handed 310
Helix 4
AA4
A
77 98Right-handed alpha
Helix 5
AA5
A
102 110Right-handed alpha
Helix 6
AA6
A
128 146Right-handed alpha
Helix 7
AA7
A
163 177Right-handed alpha
Helix 8
AA8
A
219 223Right-handed 310
Helix 9
AA9
A
242 249Right-handed alpha
Helix 10
AB1
A
270 274Right-handed 310
Helix 11
AB2
A
275 279Right-handed 310
Helix 12
AB3
A
280 285Right-handed 310
Helix 13
AB4
A
286 293Right-handed alpha
Helix 14
AB5
A
297 301Right-handed 310
Helix 15
AB6
A
317 326Right-handed alpha
Helix 16
AB7
A
327 330Right-handed 310
Helix 17
AB8
A
345 353Right-handed 310
Helix 18
AB9
A
380 385Right-handed alpha
Helix 19
AC1
A
387 406Right-handed alpha
Helix 20
AC2
A
421 428Right-handed alpha
Helix 21
AC3
A
432 436Right-handed 310
Helix 22
AC4
A
442 453Right-handed alpha
Helix 23
AC5
A
465 488Right-handed alpha
Helix 24
AC6
A
503 514Right-handed alpha
Helix 25
AC7
A
517 522Right-handed 310
Helix 26
AC8
A
531 550Right-handed alpha
Helix 27
AC9
A
551 555Right-handed 310
Helix 28
AD1
A
560 569Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5W7D.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 337first strand
Strand 2
A
255 260parallel
Strand 3
A
363 368parallel
Strand 4
A
410 415parallel
Strand 5
A
495 500parallel
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