Analysis of interatomic Contacts of Structural Units in PDB entry:
5W7I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W7I entry

There are 4 chains in PDB entry 5W7I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 53ARG 281
B
 GLY 1VAL 10
C
 ILE 53ALA 283
D
 GLY 1VAL 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5W7I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 67Right-handed alpha
Helix 2
AA2
A
69 79Right-handed alpha
Helix 3
AA3
A
92 100Right-handed alpha
Helix 4
AA4
A
102 112Right-handed alpha
Helix 5
AA5
A
126 135Right-handed alpha
Helix 6
AA6
A
136 146Right-handed alpha
Helix 7
AA7
A
159 167Right-handed alpha
Helix 8
AA8
A
169 179Right-handed alpha
Helix 9
AA9
A
192 201Right-handed alpha
Helix 10
AB1
A
206 212Right-handed alpha
Helix 11
AB2
A
227 235Right-handed alpha
Helix 12
AB3
A
237 247Right-handed alpha
Helix 13
AB4
A
260 268Right-handed alpha
Helix 14
AB5
A
270 279Right-handed alpha
Helix 15
AB6
C
60 67Right-handed alpha
Helix 16
AB7
C
69 79Right-handed alpha
Helix 17
AB8
C
92 100Right-handed alpha
Helix 18
AB9
C
102 112Right-handed alpha
Helix 19
AC1
C
126 135Right-handed alpha
Helix 20
AC2
C
136 146Right-handed alpha
Helix 21
AC3
C
159 167Right-handed alpha
Helix 22
AC4
C
169 179Right-handed alpha
Helix 23
AC5
C
192 201Right-handed alpha
Helix 24
AC6
C
206 213Right-handed alpha
Helix 25
AC7
C
227 235Right-handed alpha
Helix 26
AC8
C
237 247Right-handed alpha
Helix 27
AC9
C
260 268Right-handed alpha
Helix 28
AD1
C
270 281Right-handed alpha
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There are no sheets in PDB entry 5W7I
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il