Analysis of interatomic Contacts of Structural Units in PDB entry:
5W7M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W7M entry

There is 1 chain in PDB entry 5W7M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 16SER 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5W7M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 28Right-handed alpha
Helix 2
AA2
A
30 39Right-handed alpha
Helix 3
AA3
A
40 43Right-handed 310
Helix 4
AA4
A
58 68Right-handed alpha
Helix 5
AA5
A
72 74Right-handed 310
Helix 6
AA6
A
84 99Right-handed alpha
Helix 7
AA7
A
128 132Right-handed 310
Helix 8
AA8
A
134 145Right-handed alpha
Helix 9
AA9
A
161 172Right-handed alpha
Helix 10
AB1
A
181 187Right-handed alpha
Helix 11
AB2
A
195 207Right-handed alpha
Helix 12
AB3
A
224 232Right-handed alpha
Helix 13
AB4
A
234 243Right-handed alpha
Helix 14
AB5
A
244 252Right-handed alpha
Helix 15
AB6
A
254 268Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5W7M.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 107first strand
Strand 2
A
76 82parallel
Strand 3
A
48 53parallel
Strand 4
A
120 126parallel
Strand 5
A
146 159parallel
Strand 6
A
272 285anti-parallel
Strand 7
A
209 223anti-parallel
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