Analysis of interatomic Contacts of Structural Units in PDB entry:
5W90


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W90 entry

There is 1 chain in PDB entry 5W90 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 20GLY 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5W90. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 64Right-handed 310
Helix 2
AA2
A
65 76Right-handed alpha
Helix 3
AA3
A
79 81Right-handed 310
Helix 4
AA4
A
92 97Right-handed alpha
Helix 5
AA5
A
98 107Right-handed alpha
Helix 6
AA6
A
116 122Right-handed alpha
Helix 7
AA7
A
133 137Right-handed 310
Helix 8
AA8
A
210 224Right-handed alpha
Helix 9
AA9
A
234 238Right-handed 310
Helix 10
AB1
A
239 249Right-handed alpha
Helix 11
AB2
A
257 282Right-handed alpha
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There are 2 sheets in PDB entry 5W90. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 33first strand
Strand 2
A
36 38anti-parallel
Strand 3
A
47 51anti-parallel
Strand 4
A
54 58anti-parallel
Strand 5
A
83 87parallel
Strand 6
A
109 113parallel
Strand 7
A
145 147parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 155first strand
Strand 2
A
158 164anti-parallel
Strand 3
A
173 181anti-parallel
Strand 4
A
184 191anti-parallel
Strand 5
A
229 232parallel
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