Analysis of interatomic Contacts of Structural Units in PDB entry:
5W93


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W93 entry

There are 6 chains in PDB entry 5W93 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 741ALA 873
B
 GLY 741ALA 873
C
 ASP 744VAL 867
D
 MET 616GLU 627
E
 MET 616SER 628
F
 ASP 618GLU 627
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 5W93. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
741 775Right-handed alpha
Helix 2
AA2
A
778 807Right-handed alpha
Helix 3
AA3
A
809 840Right-handed alpha
Helix 4
AA4
A
843 873Right-handed alpha
Helix 5
AA5
B
742 775Right-handed alpha
Helix 6
AA6
B
778 807Right-handed alpha
Helix 7
AA7
B
809 840Right-handed alpha
Helix 8
AA8
B
843 873Right-handed alpha
Helix 9
AA9
C
745 756Right-handed alpha
Helix 10
AB1
C
758 775Right-handed alpha
Helix 11
AB2
C
778 803Right-handed alpha
Helix 12
AB3
C
813 840Right-handed alpha
Helix 13
AB4
C
843 867Right-handed alpha
Helix 14
AB5
D
618 625Right-handed alpha
Helix 15
AB6
E
618 624Right-handed alpha
Helix 16
AB7
E
625 627Right-handed 310
Helix 17
AB8
F
619 624Right-handed alpha
Helix 18
AB9
F
625 627Right-handed 310
Back to top of page
There are no sheets in PDB entry 5W93
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il