Analysis of interatomic Contacts of Structural Units in PDB entry:
5W95


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W95 entry

There are 2 chains in PDB entry 5W95 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 71PRO 333
B
 LEU 65PRO 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5W95. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
103 114Right-handed alpha
Helix 2
AA2
A
141 164Right-handed alpha
Helix 3
AA3
A
175 190Right-handed alpha
Helix 4
AA4
A
196 198Right-handed 310
Helix 5
AA5
A
227 232Right-handed alpha
Helix 6
AA6
A
253 258Right-handed 310
Helix 7
AA7
A
274 279Right-handed 310
Helix 8
AA8
A
282 292Right-handed alpha
Helix 9
AA9
A
297 301Right-handed 310
Helix 10
AB1
A
314 329Right-handed alpha
Helix 11
AB2
B
103 114Right-handed alpha
Helix 12
AB3
B
141 164Right-handed alpha
Helix 13
AB4
B
175 190Right-handed alpha
Helix 14
AB5
B
196 198Right-handed 310
Helix 15
AB6
B
227 232Right-handed alpha
Helix 16
AB7
B
238 242Right-handed 310
Helix 17
AB8
B
253 258Right-handed 310
Helix 18
AB9
B
274 279Right-handed 310
Helix 19
AC1
B
282 291Right-handed alpha
Helix 20
AC2
B
297 301Right-handed 310
Helix 21
AC3
B
314 329Right-handed alpha
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There are 2 sheets in PDB entry 5W95. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 123first strand
Strand 2
A
75 80parallel
Strand 3
A
168 174parallel
Strand 4
A
200 206parallel
Strand 5
A
260 263parallel
Strand 6
A
217 218parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 123first strand
Strand 2
B
75 80parallel
Strand 3
B
168 174parallel
Strand 4
B
200 206parallel
Strand 5
B
260 263parallel
Strand 6
B
217 218parallel
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