Analysis of interatomic Contacts of Structural Units in PDB entry:
5WA3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WA3 entry

There are 2 chains in PDB entry 5WA3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 5ALA 350
B
 GLU 5ALA 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5WA3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 26Right-handed alpha
Helix 2
AA2
A
26 33Right-handed alpha
Helix 3
AA3
A
60 67Right-handed alpha
Helix 4
AA4
A
67 83Right-handed alpha
Helix 5
AA5
A
90 93Right-handed 310
Helix 6
AA6
A
94 106Right-handed alpha
Helix 7
AA7
A
131 157Right-handed alpha
Helix 8
AA8
A
160 176Right-handed alpha
Helix 9
AA9
A
180 197Right-handed alpha
Helix 10
AB1
A
201 216Right-handed alpha
Helix 11
AB2
A
216 231Right-handed alpha
Helix 12
AB3
A
240 263Right-handed alpha
Helix 13
AB4
A
309 325Right-handed alpha
Helix 14
AB5
A
328 348Right-handed alpha
Helix 15
AB6
B
18 26Right-handed alpha
Helix 16
AB7
B
26 34Right-handed alpha
Helix 17
AB8
B
60 67Right-handed alpha
Helix 18
AB9
B
67 83Right-handed alpha
Helix 19
AC1
B
90 93Right-handed 310
Helix 20
AC2
B
94 106Right-handed alpha
Helix 21
AC3
B
131 158Right-handed alpha
Helix 22
AC4
B
160 176Right-handed alpha
Helix 23
AC5
B
184 199Right-handed alpha
Helix 24
AC6
B
201 216Right-handed alpha
Helix 25
AC7
B
216 231Right-handed alpha
Helix 26
AC8
B
241 264Right-handed alpha
Helix 27
AC9
B
309 325Right-handed alpha
Helix 28
AD1
B
328 348Right-handed alpha
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There are 2 sheets in PDB entry 5WA3. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 46first strand
Strand 2
A
52 59anti-parallel
Strand 3
A
6 13anti-parallel
Strand 4
A
120 125anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 46first strand
Strand 2
B
52 59anti-parallel
Strand 3
B
6 13anti-parallel
Strand 4
B
119 125anti-parallel
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