Analysis of interatomic Contacts of Structural Units in PDB entry:
5WAN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WAN entry

There is 1 chain in PDB entry 5WAN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU -2PRO 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5WAN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 41Right-handed alpha
Helix 2
AA2
A
67 78Right-handed alpha
Helix 3
AA3
A
94 110Right-handed alpha
Helix 4
AA4
A
122 128Right-handed alpha
Helix 5
AA5
A
136 159Right-handed alpha
Helix 6
AA6
A
191 202Right-handed alpha
Helix 7
AA7
A
218 231Right-handed alpha
Helix 8
AA8
A
249 263Right-handed alpha
Helix 9
AA9
A
265 273Right-handed alpha
Helix 10
AB1
A
296 300Right-handed 310
Helix 11
AB2
A
309 321Right-handed alpha
Helix 12
AB3
A
334 346Right-handed alpha
Helix 13
AB4
A
347 354Right-handed 310
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There are 2 sheets in PDB entry 5WAN. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 308first strand
Strand 2
A
237 247parallel
Strand 3
A
325 332parallel
Strand 4
A
3 7parallel
Strand 5
A
45 47parallel
Strand 6
A
83 89parallel
Strand 7
A
113 118parallel
Strand 8
A
184 187parallel
Strand 9
A
204 208parallel
Strand 10
A
237 247parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 161first strand
Strand 2
A
173 174anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il